RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 ZSCAN10Q96SZ4 725 aaPredicted RBP13.8□□□□□ -0.2
COPS4-210ENST00000511708 TBC1D17Q9HA65 648 aa13.8□□□□□ -0.2
COPS4-210ENST00000511708 FRYQ5TBA9 3013 aa13.8□□□□□ -0.2
COPS4-210ENST00000511708 PRR5-ARHGAP8B1AHC4 643 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 CCER2I3L3R5 266 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 STK25O00506 426 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 KINO60870 393 aaKnown RBP13.79□□□□□ -0.2
COPS4-210ENST00000511708 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 CFHP08603 1231 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 ARHGAP8P85298 464 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 DSC3Q14574 896 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 PHLDB3Q6NSJ2 640 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 MAML2Q8IZL2 1156 aaPredicted RBP13.79□□□□□ -0.2
COPS4-210ENST00000511708 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 GPRASP2Q96D09 838 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 RTKNQ9BST9 563 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 MAD2L2Q9UI95 211 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 RALYQ9UKM9 306 aaKnown RBP13.79□□□□□ -0.2
COPS4-210ENST00000511708 ST3GAL5Q9UNP4 418 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 SALL3Q9BXA9 1300 aa13.79□□□□□ -0.2
COPS4-210ENST00000511708 CEP295Q9C0D2 2601 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 ZZEF1O43149 2961 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 DCDC2BA2VCK2 349 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 PALM3A6NDB9 673 aaPredicted RBP13.78□□□□□ -0.2
COPS4-210ENST00000511708 POTEMA6NI47 508 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 DCNP07585 359 aaKnown RBP13.78□□□□□ -0.2
COPS4-210ENST00000511708 POTEGQ6S5H5 508 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 PIGSQ96S52 555 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 ZBP1Q9H171 429 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 RIOX1Q9H6W3 641 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 NCDNQ9UBB6 729 aa13.78□□□□□ -0.2
COPS4-210ENST00000511708 CDV3Q9UKY7 258 aaKnown RBP13.78□□□□□ -0.2
COPS4-210ENST00000511708 SPTLC1O15269 473 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 HOXA2O43364 376 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 N4BP1O75113 896 aaKnown RBP13.77□□□□□ -0.21
COPS4-210ENST00000511708 CXCL14O95715 111 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 GLULP15104 373 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 MX1P20591 662 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 TGM1P22735 817 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 LMNB2Q03252 620 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 PLCB4Q15147 1175 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 SPECC1Q5M775 1068 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 ODR4Q5SWX8 454 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 MTHFD1LQ6UB35 978 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 EVI5LQ96CN4 794 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 SFXN1Q9H9B4 322 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 ZSWIM5Q9P217 1185 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 CA14Q9ULX7 337 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 SIT1Q9Y3P8 196 aa13.77□□□□□ -0.21
COPS4-210ENST00000511708 B4E1Z4 1266 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 GPR182O15218 404 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 CYTH3O43739 400 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 SRFP11831 508 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 RFX1P22670 979 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 LETM2Q2VYF4 491 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 ZNF528Q3MIS6 628 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 CABP7Q86V35 215 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 SLC44A3Q8N4M1 653 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 RSAD2Q8WXG1 361 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 TNPO1Q92973 898 aaKnown RBP13.76□□□□□ -0.21
COPS4-210ENST00000511708 CDHR1Q96JP9 859 aa13.76□□□□□ -0.21
COPS4-210ENST00000511708 ASPMQ8IZT6 3477 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.75□□□□□ -0.21
COPS4-210ENST00000511708 CTSAP10619 480 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 ITGB5P18084 799 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 GIT2Q14161 759 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 BMS1Q14692 1282 aaKnown RBP13.75□□□□□ -0.21
COPS4-210ENST00000511708 CLLU1OSQ5K130 101 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 TICAM2Q86XR7 235 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 GINS2Q9Y248 185 aa13.75□□□□□ -0.21
COPS4-210ENST00000511708 PIK3CDO00329 1044 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 MEIS2O14770 477 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 ZNF213O14771 459 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
COPS4-210ENST00000511708 NONOQ15233 471 aaKnown RBP eCLIP13.74□□□□□ -0.21
COPS4-210ENST00000511708 SEC23AQ15436 765 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 USP17L6PQ6QN14 398 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 PLPPR4Q7Z2D5 763 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 PJA1Q8NG27 643 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 GPR152Q8TDT2 470 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 ARHGEF3Q9NR81 526 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 EPS15L1Q9UBC2 864 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 FBXO4Q9UKT5 387 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 UBIAD1Q9Y5Z9 338 aa13.74□□□□□ -0.21
COPS4-210ENST00000511708 MYH15Q9Y2K3 1946 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms