RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 IFT81Q8WYA0 676 aa15.53■□□□□ 0.08
AP003555.1-202ENST00000511013 PRMT6Q96LA8 375 aaPredicted RBP15.53■□□□□ 0.08
AP003555.1-202ENST00000511013 WDR18Q9BV38 432 aa15.53■□□□□ 0.08
AP003555.1-202ENST00000511013 STK33Q9BYT3 514 aa15.53■□□□□ 0.08
AP003555.1-202ENST00000511013 FRMD4BQ9Y2L6 1034 aa15.53■□□□□ 0.08
AP003555.1-202ENST00000511013 SMCHD1A6NHR9 2005 aa15.53■□□□□ 0.08
AP003555.1-202ENST00000511013 FRMPD4Q14CM0 1322 aa15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 NMT1P30419 496 aaKnown RBP15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 CARSP49589 748 aaKnown RBP15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 ZNF131P52739 623 aa15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 MYBPC2Q14324 1141 aa15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 RRP1BQ14684 758 aaKnown RBP15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 PPP2R5AQ15172 486 aa15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 CEP55Q53EZ4 464 aa15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 TSEN2Q8NCE0 465 aaKnown RBP15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 RANBP17Q9H2T7 1088 aaKnown RBP15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 SUCLA2Q9P2R7 463 aaPredicted RBP15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 NFU1Q9UMS0 254 aa15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 MYH11P35749 1972 aa15.52■□□□□ 0.08
AP003555.1-202ENST00000511013 SFI1A8K8P3 1242 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 PGRMC1O00264 195 aaKnown RBP15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 CEP104O60308 925 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 VIL1P09327 827 aaKnown RBP15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 HSPA1LP34931 641 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 SOX5P35711 763 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 FMO5P49326 533 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 CUL1Q13616 776 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 ZNF720Q7Z2F6 126 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 PEX26Q7Z412 305 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 SLFN11Q7Z7L1 901 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 SRLQ86TD4 932 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 CD302Q8IX05 232 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 FAM178BQ8IXR5 827 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 NEK9Q8TD19 979 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 SCFD2Q8WU76 684 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 FAM151AQ8WW52 585 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 TEKT3Q9BXF9 490 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 DMAC2Q9NW81 257 aa15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 ZNF219Q9P2Y4 722 aaPredicted RBP15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 PACSIN2Q9UNF0 486 aaPredicted RBP15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 RRP15Q9Y3B9 282 aaKnown RBP15.52■□□□□ 0.07
AP003555.1-202ENST00000511013 ZMYM2Q9UBW7 1377 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 CCDC188H7C350 402 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 CHMP2AO43633 222 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 GUCY2CP25092 1073 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 KCNA1Q09470 495 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 CCDC174Q6PII3 467 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 IQCKQ8N0W5 287 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 C1orf131Q8NDD1 294 aaKnown RBP15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 U2AF1L4Q8WU68 220 aaKnown RBP15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 CASKIN2Q8WXE0 1202 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 VTI1AQ96AJ9 217 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 ZNF577Q9BSK1 485 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 CAPS2Q9BXY5 557 aa15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 TAF1DQ9H5J8 278 aaPredicted RBP15.51■□□□□ 0.07
AP003555.1-202ENST00000511013 ARHGEF35A5YM69 484 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 APBA3O96018 575 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 RFX1P22670 979 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 IRAK1P51617 712 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 SKOR1P84550 965 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 MSL1Q68DK7 614 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 SLC9A9Q8IVB4 645 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 SLC30A5Q8TAD4 765 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 ACER1Q8TDN7 264 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 C7orf43Q8WVR3 580 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 CCDC43Q96MW1 224 aaKnown RBP15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 ZIM3Q96PE6 472 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 RIT2Q99578 217 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 ISCUQ9H1K1 167 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 POLD4Q9HCU8 107 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 FEM1BQ9UK73 627 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 ZBTB21Q9ULJ3 1066 aa15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 DIS3Q9Y2L1 958 aaKnown RBP15.5■□□□□ 0.07
AP003555.1-202ENST00000511013 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 RAD51CO43502 376 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 ECE1P42892 770 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 IRX5P78411 483 aaPredicted RBP15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 ALCAMQ13740 583 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 GRIPAP1Q4V328 841 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 ZC2HC1CQ53FD0 456 aaPredicted RBP15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 ODR4Q5SWX8 454 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 KLHL7Q8IXQ5 586 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 FAM107BQ9H098 131 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 AGPAT3Q9NRZ7 376 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 RSPH14Q9UHP6 348 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 DNAJC12Q9UKB3 198 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 STXBP5LQ9Y2K9 1186 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 SPDYE2BA6NHP3 402 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 TCP10L2B9ZVM9 353 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 F8VZ95 297 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 PPIP5K2O43314 1243 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 EVI5O60447 810 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 SPDYE6P0CI01 402 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 GALCP54803 685 aa15.49■□□□□ 0.07
AP003555.1-202ENST00000511013 RNASE9P60153 205 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms