RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	GPATCH4	Q5T3I0	446 aa	Known RBP	12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	SLC24A5	Q71RS6	500 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	CABP7	Q86V35	215 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	KBTBD3	Q8NAB2	608 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	MAP4K1	Q92918	833 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	SHD	Q96IW2	340 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	ZNF558	Q96NG5	402 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	RHOBTB2	Q9BYZ6	727 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	PRMT8	Q9NR22	394 aa	Predicted RBP	12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	TCP11L1	Q9NUJ3	509 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	MAP3K20	Q9NYL2	800 aa	Known RBP	12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	LHX6	Q9UPM6	363 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	MRPL11	Q9Y3B7	192 aa	Known RBP	12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	TRPV2	Q9Y5S1	764 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	SRRM3	A6NNA2	597 aa	Predicted RBP	12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	RNF113A	O15541	343 aa	Known RBP	12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	LIMK1	P53667	647 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	PTPN14	Q15678	1187 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	PRR23C	Q6ZRP0	262 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	CYFIP1	Q7L576	1253 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	SLC39A11	Q8N1S5	342 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	TMEM117	Q9H0C3	514 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	NAPB	Q9H115	298 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	ELAC1	Q9H777	363 aa	Known RBP	12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	SEMA4G	Q9NTN9	838 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	TMEM161A	Q9NX61	479 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	ANAPC4	Q9UJX5	808 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	TELO2	Q9Y4R8	837 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	CFAP46	Q8IYW2	2715 aa		12.49	□□□□□ -0.41
PTCD2-208	ENST00000510676	MYO18B	Q8IUG5	2567 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	KANSL1L	A0AUZ9	987 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	SPATA31C2	B4DYI2	1134 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	ANHX	E9PGG2	379 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	GDF9	O60383	454 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	RANBP6	O60518	1105 aa	Known RBP	12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	CXCL14	O95715	111 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	ZFY	P08048	801 aa	Predicted RBP	12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	FGFR1	P11362	822 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	CCND2	P30279	289 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	PBX3	P40426	434 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	GIT2	Q14161	759 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	CMAS	Q8NFW8	434 aa	Predicted RBP	12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	FRAT1	Q92837	279 aa	Predicted RBP	12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	CASD1	Q96PB1	797 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	INPP4A	Q96PE3	977 aa	Predicted RBP	12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	CELF4	Q9BZC1	486 aa	Known RBP	12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	ZBP1	Q9H171	429 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	DOCK8	Q8NF50	2099 aa		12.48	□□□□□ -0.41
PTCD2-208	ENST00000510676	MIA3	Q5JRA6	1907 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	CFB	P00751	764 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	TDGF1	P13385	188 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	SEMA3F	Q13275	785 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	BMS1	Q14692	1282 aa	Known RBP	12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	UTP14C	Q5TAP6	766 aa	Known RBP	12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	PPFIBP1	Q86W92	1011 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	LRRC43	Q8N309	656 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	SAMD3	Q8N6K7	520 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	CELF5	Q8N6W0	485 aa	Known RBP	12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	CLDN23	Q96B33	292 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	ADAM2	Q99965	735 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	SENP7	Q9BQF6	1050 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	CPVL	Q9H3G5	476 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	ATP6V0A4	Q9HBG4	840 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	WDR6	Q9NNW5	1121 aa	Known RBP	12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	IGSF5	Q9NSI5	407 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	RNF19A	Q9NV58	838 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	WASF3	Q9UPY6	502 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	C2orf16	Q68DN1	1984 aa		12.47	□□□□□ -0.41
PTCD2-208	ENST00000510676	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676		M0QZ92	97 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	FOXP2	O15409	715 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	ZIC2	O95409	532 aa	Predicted RBP	12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	PAPLN	O95428	1278 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	POLG	P54098	1239 aa	Predicted RBP	12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	CTDSPL2	Q05D32	466 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	HTR4	Q13639	388 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	WTAP	Q15007	396 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	TMEM266	Q2M3C6	531 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	QRICH1	Q2TAL8	776 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	GNPTAB	Q3T906	1256 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	CYP26C1	Q6V0L0	522 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	STAM	Q92783	540 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	TTC14	Q96N46	770 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	UBA5	Q9GZZ9	404 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	ERAP1	Q9NZ08	941 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	RAB23	Q9ULC3	237 aa		12.46	□□□□□ -0.41
PTCD2-208	ENST00000510676	DENND3	A2RUS2	1198 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	RRN3P2	A6NIE6	340 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	HOXA2	O43364	376 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	RAB11FIP3	O75154	756 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	STAM2	O75886	525 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	CTSA	P10619	480 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	MRPS9	P82933	396 aa	Known RBP	12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	PRKCQ	Q04759	706 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	ZKSCAN2	Q63HK3	967 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	IL31	Q6EBC2	164 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	RSPO2	Q6UXX9	243 aa	Predicted RBP	12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	ADGRF4	Q8IZF3	695 aa		12.45	□□□□□ -0.42
PTCD2-208	ENST00000510676	NME8	Q8N427	588 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms