RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199		A0A1W2PQY0	241 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	MAGEB2	O15479	319 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	GAS2	O43903	313 aa	Known RBP	13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	MAF	O75444	373 aa	Predicted RBP	13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	LETM1	O95202	739 aa	Predicted RBP	13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	SMC2	O95347	1197 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	TFRC	P02786	760 aa	Known RBP	13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	CASP1	P29466	404 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	HOXC8	P31273	242 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	GJA8	P48165	433 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	POLG	P54098	1239 aa	Predicted RBP	13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	CHMP4BP1	P59074	171 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	ASIC1	P78348	528 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	GIT2	Q14161	759 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	GRIK4	Q16099	956 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	NBPF20	Q3BBV1	942 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	NFRKB	Q6P4R8	1299 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	DYM	Q7RTS9	669 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	SESTD1	Q86VW0	696 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	C7orf31	Q8N865	590 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	ANKLE1	Q8NAG6	615 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	MCPH1	Q8NEM0	835 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	SPATA20	Q8TB22	786 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	SLC7A3	Q8WY07	619 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	REEP2	Q9BRK0	252 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	TMEM106C	Q9BVX2	250 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	KIAA1468	Q9P260	1216 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	ODF2L	Q9ULJ1	636 aa		13.28	□□□□□ -0.28
RACK1-223	ENST00000510199	IGKV6-21	A0A0C4DH24	114 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	PVALEF	A0A1B0GWK0	134 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	KLRC4	O43908	158 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	RPN1	P04843	607 aa	Known RBP	13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	GNAT1	P11488	350 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	KLRC1	P26715	233 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	SARS	P49591	514 aa	Known RBP	13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	IGBP1	P78318	339 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	ADAM17	P78536	824 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	PTPN11	Q06124	597 aa	Predicted RBP	13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	EMC2	Q15006	297 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	NT5DC1	Q5TFE4	455 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	UNC13D	Q70J99	1090 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	CCDC65	Q8IXS2	484 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	RETREG2	Q8NC44	543 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	LMBR1	Q8WVP7	490 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	TRAPPC12	Q8WVT3	735 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	SMARCE1	Q969G3	411 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	VTI1A	Q96AJ9	217 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	GSDMA	Q96QA5	445 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	SEZ6L	Q9BYH1	1024 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	XPNPEP1	Q9NQW7	623 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	SETD4	Q9NVD3	440 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	HDAC6	Q9UBN7	1215 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	GTF2IRD1	Q9UHL9	959 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	TUBE1	Q9UJT0	475 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	PCDHA5	Q9Y5H7	936 aa		13.27	□□□□□ -0.29
RACK1-223	ENST00000510199	BRCA2	P51587	3418 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	FRMD3	A2A2Y4	597 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	C17orf102	A2RUQ5	167 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	GRIN2D	O15399	1336 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	HIP1R	O75146	1068 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	TBCA	O75347	108 aa	Known RBP	13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	C22orf31	O95567	290 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	IDE	P14735	1019 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	ZNF131	P52739	623 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	RAD51AP2	Q09MP3	1159 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	MAPK7	Q13164	816 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	ITGA7	Q13683	1181 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	KCNB1	Q14721	858 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	MARCH8	Q5T0T0	291 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	MTHFD1L	Q6UB35	978 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	TCP11	Q8WWU5	503 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	KIFAP3	Q92845	792 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	ERCC4	Q92889	916 aa	Predicted RBP	13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	CCDC47	Q96A33	483 aa	Known RBP	13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	DRC1	Q96MC2	740 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	STARD7	Q9NQZ5	370 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	PANK4	Q9NVE7	773 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	RMND1	Q9NWS8	449 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199	COL4A3BP	Q9Y5P4	624 aa		13.26	□□□□□ -0.29
RACK1-223	ENST00000510199		A0A0U1RQG5	324 aa	Predicted RBP	13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	RSPH10B2	B2RC85	870 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	FAM13A	O94988	1023 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	RSPH10B	P0C881	870 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	GAP43	P17677	238 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	TMOD1	P28289	359 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	MNX1	P50219	401 aa	Predicted RBP	13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	DNM2	P50570	870 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	RTP1	P59025	263 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	CACNB1	Q02641	598 aa	Predicted RBP	13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	KMT5B	Q4FZB7	885 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	FAM102B	Q5T8I3	360 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	IER5	Q5VY09	327 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	EFCAB12	Q6NXP0	572 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	MAEA	Q7L5Y9	396 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	DAW1	Q8N136	415 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	LINC01465	Q8N7H1	131 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	TRIML1	Q8N9V2	468 aa		13.25	□□□□□ -0.29
RACK1-223	ENST00000510199	SLC43A3	Q8NBI5	491 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms