RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 BCRP11274 1271 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 MYCLP12524 364 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 HTRA3P83110 453 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 LRRC55Q6ZSA7 311 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 REM2Q8IYK8 340 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 DNERQ8NFT8 737 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 TRIM58Q8NG06 486 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 RUBCNQ92622 972 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 SECISBP2LQ93073 1101 aaKnown RBP17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 LENG9Q96B70 501 aa17.65■□□□□ 0.42
SQSTM1-213ENST00000510187 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 CA12O43570 354 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 ALDH1A1P00352 501 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 TFRCP02786 760 aaKnown RBP17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 NR3C2P08235 984 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 MRPS9P82933 396 aaKnown RBP17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 C17orf99Q6UX52 265 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 HAS1Q92839 578 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 MXRA8Q9BRK3 442 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 LACRTQ9GZZ8 138 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 IVNS1ABPQ9Y6Y0 642 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 RCCD1A6NED2 376 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 CCND2P30279 289 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 MAPK4P31152 587 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 ITIH3Q06033 890 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 CASP8Q14790 479 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 XRRA1Q6P2D8 792 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 ZNF572Q7Z3I7 529 aaPredicted RBP17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 FAM133AQ8N9E0 248 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 DDX12PQ92771 950 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 UIMC1Q96RL1 719 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 NT5C3AQ9H0P0 336 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 PDE11AQ9HCR9 933 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 KCNMB3Q9NPA1 279 aa17.64■□□□□ 0.41
SQSTM1-213ENST00000510187 DNAJC25-GNG10A0A024R161 153 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 POTEMA6NI47 508 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 MEIS1O00470 390 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 ENC1O14682 589 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 STRNO43815 780 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 TACC1O75410 805 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 PRLRP16471 622 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 ITGB5P18084 799 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 ALDH5A1P51649 535 aaPredicted RBP17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 SETQ01105 290 aaPredicted RBP17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 GPR142Q7Z601 462 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 VSIG10LQ86VR7 867 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 ETNPPLQ8TBG4 499 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 HPS3Q969F9 1004 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 GJA10Q969M2 543 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 IWS1Q96ST2 819 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 MMS19Q96T76 1030 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 NUCKS1Q9H1E3 243 aaKnown RBP17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 MED4Q9NPJ6 270 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 HDAC6Q9UBN7 1215 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 JRKLQ9Y4A0 524 aa17.63■□□□□ 0.41
SQSTM1-213ENST00000510187 ASTN1O14525 1302 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 SOWAHBA6NEL2 793 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 TBX3O15119 743 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 MSH4O15457 936 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 VEGFBP49765 207 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 ZCWPW2Q504Y3 356 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 DYMQ7RTS9 669 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 PLEKHH3Q7Z736 793 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 SLFN12Q8IYM2 578 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 MYOCDQ8IZQ8 938 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 FAM71BQ8TC56 605 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 CEP63Q96MT8 703 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 IFIH1Q9BYX4 1025 aaKnown RBP17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 PCDHA12Q9UN75 941 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 UBIAD1Q9Y5Z9 338 aa17.62■□□□□ 0.41
SQSTM1-213ENST00000510187 SSU72P8A0A1W2PR75 194 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 ERICH4A6NGS2 130 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 ECM2O94769 699 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 GNA14O95837 355 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 IDEP14735 1019 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 ADORA2AP29274 412 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 KIF11P52732 1056 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 COASYQ13057 564 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 NIPA1Q7RTP0 329 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 ABRAQ8N0Z2 381 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 SYN2Q92777 582 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 DNAJC19Q96DA6 116 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 FAM20AQ96MK3 541 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 WDR11Q9BZH6 1224 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 JADE2Q9NQC1 790 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 BMP2KQ9NSY1 1161 aaPredicted RBP17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 ARHGAP20Q9P2F6 1191 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 PCDHA13Q9Y5I0 950 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 ZNF263O14978 683 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 PJA2O43164 708 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 ARP10275 920 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 MAP2K2P36507 400 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 AARSP49588 968 aaKnown RBP eCLIP17.61■□□□□ 0.411e-7■□□□□ 8.5
SQSTM1-213ENST00000510187 FKBP3Q00688 224 aaKnown RBP17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 MTMR1Q13613 665 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 HSP90B2PQ58FF3 399 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 CCDC70Q6NSX1 233 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 PDXDC1Q6P996 788 aa17.61■□□□□ 0.41
SQSTM1-213ENST00000510187 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
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