RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TCP11L1Q9NUJ3 509 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 TMEM161AQ9NX61 479 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 EPS15L1Q9UBC2 864 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 BPTFQ12830 3046 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 ZIC2O95409 532 aaPredicted RBP12.51□□□□□ -0.41
SNF8-207ENST00000509995 CXCL14O95715 111 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 MARK3P27448 753 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 GBP2P32456 591 aaPredicted RBP12.51□□□□□ -0.41
SNF8-207ENST00000509995 SP4Q02446 784 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 C15orf39Q6ZRI6 1047 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 PRR23CQ6ZRP0 262 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 FAM43BQ6ZT52 329 aaPredicted RBP12.51□□□□□ -0.41
SNF8-207ENST00000509995 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
SNF8-207ENST00000509995 ADGRF4Q8IZF3 695 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 SLC39A11Q8N1S5 342 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 TMEM87AQ8NBN3 555 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 SHDQ96IW2 340 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 SEC62Q99442 399 aaKnown RBP12.51□□□□□ -0.41
SNF8-207ENST00000509995 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
SNF8-207ENST00000509995 ZBP1Q9H171 429 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 SLC2A4RGQ9NR83 387 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 RAB23Q9ULC3 237 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 IRAK3Q9Y616 596 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 KDM3AQ9Y4C1 1321 aa12.51□□□□□ -0.41
SNF8-207ENST00000509995 GDF9O60383 454 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 RAB11FIP3O75154 756 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 FGRP09769 529 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
SNF8-207ENST00000509995 TCF7P36402 384 aaPredicted RBP12.5□□□□□ -0.41
SNF8-207ENST00000509995 MAGEA9P43362 315 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 IGBP1P78318 339 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 RING1Q06587 406 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 IL31Q6EBC2 164 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 LAIR1Q6GTX8 287 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 AUTS2Q8WXX7 1259 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 CASD1Q96PB1 797 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 INPP4AQ96PE3 977 aaPredicted RBP12.5□□□□□ -0.41
SNF8-207ENST00000509995 SEMA4GQ9NTN9 838 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 MAP3K20Q9NYL2 800 aaKnown RBP12.5□□□□□ -0.41
SNF8-207ENST00000509995 ERAP1Q9NZ08 941 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 ANAPC4Q9UJX5 808 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 PCDHA1Q9Y5I3 950 aa12.5□□□□□ -0.41
SNF8-207ENST00000509995 ITPR1Q14643 2758 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 KANSL1LA0AUZ9 987 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
SNF8-207ENST00000509995 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 FOXP2O15409 715 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 RETP07949 1114 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 RLBP1P12271 317 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 GIT2Q14161 759 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 LPAL2Q16609 132 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 TSSK4Q6SA08 328 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 STAMQ92783 540 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 DDX23Q9BUQ8 820 aaKnown RBP12.49□□□□□ -0.41
SNF8-207ENST00000509995 ELAC1Q9H777 363 aaKnown RBP12.49□□□□□ -0.41
SNF8-207ENST00000509995 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
SNF8-207ENST00000509995 FREM2Q5SZK8 3169 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 CLUHO75153 1309 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 LAMA1P25391 3075 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 SRRM3A6NNA2 597 aaPredicted RBP12.48□□□□□ -0.41
SNF8-207ENST00000509995 TAF4O00268 1085 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 HOXA2O43364 376 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 FIBPO43427 364 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
SNF8-207ENST00000509995 KRT76Q01546 638 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 CSRP2Q16527 193 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
SNF8-207ENST00000509995 PPFIBP1Q86W92 1011 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 VPS52Q8N1B4 723 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 TMEM169Q96HH4 297 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 TTC14Q96N46 770 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 MYADMQ96S97 322 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 FAM126AQ9BYI3 521 aaPredicted RBP12.48□□□□□ -0.41
SNF8-207ENST00000509995 OSBPL6Q9BZF3 934 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 WDR6Q9NNW5 1121 aaKnown RBP12.48□□□□□ -0.41
SNF8-207ENST00000509995 PRMT8Q9NR22 394 aaPredicted RBP12.48□□□□□ -0.41
SNF8-207ENST00000509995 RNF19AQ9NV58 838 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 GREB1Q4ZG55 1949 aa12.48□□□□□ -0.41
SNF8-207ENST00000509995 TMEM8BA6NDV4 472 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 RRN3P2A6NIE6 340 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 STAM2O75886 525 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 CTSAP10619 480 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNF8-207ENST00000509995 FAM189BP81408 668 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 UBXN2BQ14CS0 331 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 ABI1Q8IZP0 508 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 TMEM40Q8WWA1 233 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 SENP7Q9BQF6 1050 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 AMNQ9BXJ7 453 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 NOC2LQ9Y3T9 749 aaKnown RBP12.47□□□□□ -0.41
SNF8-207ENST00000509995 MTF2Q9Y483 593 aaPredicted RBP12.47□□□□□ -0.41
SNF8-207ENST00000509995 PCDHA2Q9Y5H9 948 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 AKAP13Q12802 2813 aa12.47□□□□□ -0.41
SNF8-207ENST00000509995 FRMPD4Q14CM0 1322 aa12.46□□□□□ -0.41
SNF8-207ENST00000509995 NT5C1B-RDH14C9J2C7 533 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms