RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 LRRC74BQ6ZQY2 392 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 VSIG1Q86XK7 387 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 TBC1D10CQ8IV04 446 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 NAT14Q8WUY8 206 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 RNF25Q96BH1 459 aaPredicted RBP10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 GRAMD1AQ96CP6 724 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 MYLK2Q9H1R3 596 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 GPR108Q9NPR9 543 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 DDX43Q9NXZ2 648 aaKnown RBP10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 AMACRQ9UHK6 382 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 LNPEPQ9UIQ6 1025 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 CNOT7Q9UIV1 285 aaKnown RBP10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 ITGB1BP2Q9UKP3 347 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 SLC12A7Q9Y666 1083 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 WNK3Q9BYP7 1800 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 LRP6O75581 1613 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 BICDL2A1A5D9 508 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 SMIM23A6NLE4 172 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 KRIT1O00522 736 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 SUPT3HO75486 399 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 BCRP11274 1271 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 ALOX15P16050 662 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 KLRC1P26715 233 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 LIFRP42702 1097 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 CD97P48960 835 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 RASSF2P50749 326 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 USP11P51784 963 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 AP1B1Q10567 949 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 PRPF4BQ13523 1007 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 RABL6Q3YEC7 729 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 TMEM259Q4ZIN3 620 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 TMEM67Q5HYA8 995 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 NKX2-3Q8TAU0 364 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 NRG4Q8WWG1 115 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 CKAP2Q8WWK9 683 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 BAP1Q92560 729 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 KCNN1Q92952 543 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 FAM81BQ96LP2 452 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 MPHOSPH6Q99547 160 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 PUS3Q9BZE2 481 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 FAM207AQ9NSI2 230 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 PASKQ96RG2 1323 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 ATP9BO43861 1147 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 UBTFL6P0CB48 400 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 ETS2P15036 469 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 EPHB2P29323 1055 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 ATP2C1P98194 919 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 GIT2Q14161 759 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 HGSNATQ68CP4 663 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 CGB2Q6NT52 195 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 MARK2Q7KZI7 788 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 TMTC2Q8N394 836 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 NME8Q8N427 588 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 ARL10Q8N8L6 244 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 GIMAP8Q8ND71 665 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 APPBP2Q92624 585 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 HAUS1Q96CS2 278 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 EDEM3Q9BZQ6 932 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 CCDC113Q9H0I3 377 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 TLE6Q9H808 572 aa10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 DDX25Q9UHL0 483 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-207ENST00000509092 TRAFD1O14545 582 aaPredicted RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 MAP3K7O43318 606 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 PABPC4LP0CB38 370 aaKnown RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 VAV1P15498 845 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 CCNE1P24864 410 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 TARSP26639 723 aaKnown RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 MLH1P40692 756 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 POLGP54098 1239 aaPredicted RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 SLC34A1Q06495 639 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 NEXNQ0ZGT2 675 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 LRRC14Q15048 493 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 RCN1Q15293 331 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 DDB1Q16531 1140 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 TDRD12Q587J7 1177 aaKnown RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 MFSD5Q6N075 450 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 DUS1LQ6P1R4 473 aaKnown RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 ANKS1AQ92625 1134 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 P2RX5Q93086 422 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 SLC7A6OSQ96CW6 309 aaPredicted RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 ZNF184Q99676 751 aaPredicted RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 UBA5Q9GZZ9 404 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 ASCC2Q9H1I8 757 aaPredicted RBP10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 HAO1Q9UJM8 370 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 USH1CQ9Y6N9 552 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 KIF1AQ12756 1690 aa10.81□□□□□ -0.68
PDGFRA-207ENST00000509092 BTBD11A6QL63 1104 aa10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 BTNL10A8MVZ5 291 aa10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 B4E1Z4 1266 aa10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 BTBD19C9JJ37 291 aa10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 HGSO14964 777 aaPredicted RBP10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 RHOBTB3O94955 611 aa10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 POTEJP0CG39 1038 aa10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 FUT4P22083 530 aa10.8□□□□□ -0.68
PDGFRA-207ENST00000509092 MARK3P27448 753 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms