RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PSEN1P49768 467 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 TRIM32Q13049 653 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 MORC3Q14149 939 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.57
RFC1-211ENST00000509084 MTERF2Q49AM1 385 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 KMT5BQ4FZB7 885 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.57
RFC1-211ENST00000509084 ZNF658Q5TYW1 1059 aaPredicted RBP11.52□□□□□ -0.57
RFC1-211ENST00000509084 PLA2G4FQ68DD2 849 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 C1orf186Q6ZWK4 172 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 DYMQ7RTS9 669 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 CTU1Q7Z7A3 348 aaKnown RBP11.52□□□□□ -0.57
RFC1-211ENST00000509084 TRIM50Q86XT4 487 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 MLKLQ8NB16 471 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 SLC7A3Q8WY07 619 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 DNAJC19Q96DA6 116 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 DRC1Q96MC2 740 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 REEP2Q9BRK0 252 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 RUSC1Q9BVN2 902 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 NAT10Q9H0A0 1025 aaKnown RBP11.52□□□□□ -0.57
RFC1-211ENST00000509084 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.57
RFC1-211ENST00000509084 ATP6V0A4Q9HBG4 840 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 PANK4Q9NVE7 773 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 KCNG1Q9UIX4 513 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 SYNRGQ9UMZ2 1314 aa11.52□□□□□ -0.57
RFC1-211ENST00000509084 BIN1O00499 593 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 ADAMTS4O75173 837 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 FAM13AO94988 1023 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 KIF20AO95235 890 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 HSPA1AP0DMV8 641 aaKnown RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 HSPA1BP0DMV9 641 aaKnown RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 MARK3P27448 753 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 CASP1P29466 404 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 POLGP54098 1239 aaPredicted RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 COASYQ13057 564 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 STIM1Q13586 685 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 GIT2Q14161 759 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 PLCB4Q15147 1175 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 TARBP2Q15633 366 aaKnown RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 ARSHQ5FYA8 562 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 STXBP4Q6ZWJ1 553 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 RNF180Q86T96 592 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 PCSK9Q8NBP7 692 aaKnown RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 SLC17A8Q8NDX2 589 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 KIFAP3Q92845 792 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 ERCC4Q92889 916 aaPredicted RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 LENG1Q96BZ8 264 aaPredicted RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 C16orf70Q9BSU1 422 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 C17orf75Q9HAS0 396 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 PARVGQ9HBI0 331 aa11.51□□□□□ -0.57
RFC1-211ENST00000509084 LARSQ9P2J5 1176 aaKnown RBP11.51□□□□□ -0.57
RFC1-211ENST00000509084 A0A087WWV3 80 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 ZBTB39O15060 712 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 MAGEB2O15479 319 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 ZNF286BP0CG31 522 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 SCP2P22307 547 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 ABCD1P33897 745 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 ZNF131P52739 623 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 NPEPPSP55786 919 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 RTP1P59025 263 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 EHHADHQ08426 723 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 TBC1D8BQ0IIM8 1120 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 EMC2Q15006 297 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 COBLL1Q53SF7 1204 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 GNASQ5JWF2 1037 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 FAM26FQ5R3K3 315 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 FBXO46Q6PJ61 603 aaPredicted RBP11.5□□□□□ -0.57
RFC1-211ENST00000509084 TRMT1LQ7Z2T5 733 aaKnown RBP11.5□□□□□ -0.57
RFC1-211ENST00000509084 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 TCP11Q8WWU5 503 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
RFC1-211ENST00000509084 ZHX3Q9H4I2 956 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 DHX33Q9H6R0 707 aaKnown RBP11.5□□□□□ -0.57
RFC1-211ENST00000509084 OLFML3Q9NRN5 406 aa11.5□□□□□ -0.57
RFC1-211ENST00000509084 TMEM150BA6NC51 233 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 H0YCG3 227 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 HAS3O00219 553 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 HIP1RO75146 1068 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 MAFO75444 373 aaPredicted RBP11.49□□□□□ -0.57
RFC1-211ENST00000509084 CABYRO75952 493 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 MYL3P08590 195 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 MAPTP10636 758 aaKnown RBP11.49□□□□□ -0.57
RFC1-211ENST00000509084 PTGS1P23219 599 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 PSEN2P49810 448 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 PURAQ00577 322 aaKnown RBP11.49□□□□□ -0.57
RFC1-211ENST00000509084 PPFIA1Q13136 1202 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 ALCAMQ13740 583 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 MFSD10Q14728 455 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 PPP2R5AQ15172 486 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 ANO6Q4KMQ2 910 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 HERC4Q5GLZ8 1057 aaPredicted RBP11.49□□□□□ -0.57
RFC1-211ENST00000509084 KLHDC9Q8NEP7 349 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 BPIFA3Q9BQP9 254 aa11.49□□□□□ -0.57
RFC1-211ENST00000509084 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms