RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 SEPT8Q92599 483 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 TEKT3Q9BXF9 490 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 IFIH1Q9BYX4 1025 aaKnown RBP9.76□□□□□ -0.85
SNCA-211ENST00000508895 CELF4Q9BZC1 486 aaKnown RBP9.76□□□□□ -0.85
SNCA-211ENST00000508895 FOXP1Q9H334 677 aaPredicted RBP9.76□□□□□ -0.85
SNCA-211ENST00000508895 RC3H2Q9HBD1 1191 aaKnown RBP9.76□□□□□ -0.85
SNCA-211ENST00000508895 ERVK-5Q9HDB9 667 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 RGL1Q9NZL6 768 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 MTUS1Q9ULD2 1270 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 PADI3Q9ULW8 664 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 NOC2LQ9Y3T9 749 aaKnown RBP9.76□□□□□ -0.85
SNCA-211ENST00000508895 TRPV2Q9Y5S1 764 aa9.76□□□□□ -0.85
SNCA-211ENST00000508895 VPS37CA5D8V6 355 aaPredicted RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 WDR64B1ANS9 1081 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 CCNT1O60563 726 aaKnown RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 CSDE1O75534 798 aaKnown RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 PARNO95453 639 aaKnown RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 OATP04181 439 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 SYT1P21579 422 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 IGFBP4P22692 258 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 GRB10Q13322 594 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 ZNF484Q5JVG2 852 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 PPP4R3AQ6IN85 833 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 TAF2Q6P1X5 1199 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 TSHZ1Q6ZSZ6 1077 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 ANO5Q75V66 913 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 FAM228AQ86W67 206 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 CKAP2LQ8IYA6 745 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 SMAP1Q8IYB5 467 aaPredicted RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 SP7Q8TDD2 431 aaPredicted RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
SNCA-211ENST00000508895 TOP1MTQ969P6 601 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 OSMRQ99650 979 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 ADAMTS10Q9H324 1103 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 GINS2Q9Y248 185 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 SAMM50Q9Y512 469 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 MTCH2Q9Y6C9 303 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 COL1A2P08123 1366 aa9.75□□□□□ -0.85
SNCA-211ENST00000508895 RALGAPA2Q2PPJ7 1873 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 PLXNA4Q9HCM2 1894 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 H3BQV1 296 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 GCFC2P16383 781 aaKnown RBP9.74□□□□□ -0.85
SNCA-211ENST00000508895 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 PDCP20941 246 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 SLC26A2P50443 739 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 PPP2R5CQ13362 524 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 MTERF2Q49AM1 385 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 MCTP1Q6DN14 999 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 EFCAB12Q6NXP0 572 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 SPRYD3Q8NCJ5 442 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 DYDC2Q96IM9 177 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 MTMR9Q96QG7 549 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 RAD9AQ99638 391 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
SNCA-211ENST00000508895 MTMR6Q9Y217 621 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 KDM3AQ9Y4C1 1321 aa9.74□□□□□ -0.85
SNCA-211ENST00000508895 IGKV6-21A0A0C4DH24 114 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 AMHP03971 560 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 IBSPP21815 317 aaPredicted RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 TOB1P50616 345 aaPredicted RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 JAK3P52333 1124 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 NLRP11P59045 1033 aaKnown RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 ERVK-21P61565 698 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 RESTQ13127 1097 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 GNL2Q13823 731 aaKnown RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 PKP1Q13835 747 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 CTTNQ14247 550 aaKnown RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 DSC3Q14574 896 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 TTC38Q5R3I4 469 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 FERMT3Q86UX7 667 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 METTL13Q8N6R0 699 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 C4orf32Q8N8J7 132 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 ZNF689Q96CS4 500 aaPredicted RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 ZBED2Q9BTP6 218 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 RNF19AQ9NV58 838 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
SNCA-211ENST00000508895 ST3GAL5Q9UNP4 418 aa9.73□□□□□ -0.85
SNCA-211ENST00000508895 POTEMA6NI47 508 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 STX6O43752 255 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 NEMFO60524 1076 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 SFNP31947 248 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 TRAPPC10P48553 1259 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 GPC3P51654 580 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 CYP4A11Q02928 519 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 NFX1Q12986 1120 aaKnown RBP9.72□□□□□ -0.85
SNCA-211ENST00000508895 BECN1Q14457 450 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 ZNF174Q15697 407 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 IER5Q5VY09 327 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 NCAPH2Q6IBW4 605 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 FAM20AQ96MK3 541 aa9.72□□□□□ -0.85
SNCA-211ENST00000508895 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
SNCA-211ENST00000508895 NAP1L4Q99733 375 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms