RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 DBHP09172 617 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 TM4SF1P30408 202 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 VIPR1P32241 457 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 TGFB2P61812 414 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 SRSF3P84103 164 aaKnown RBP4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 DDR1Q08345 913 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 ZNF790Q6PG37 636 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 RPTNQ6XPR3 784 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 SYDE1Q6ZW31 735 aaPredicted RBP4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 TMC6Q7Z403 805 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 CABP7Q86V35 215 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 NLRP10Q86W26 655 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 SCUBE1Q8IWY4 988 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 TTC5Q8N0Z6 440 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 FBXO15Q8NCQ5 510 aaPredicted RBP4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 PLEKHO2Q8TD55 490 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 RELTQ969Z4 430 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 TRMT2BQ96GJ1 504 aaKnown RBP4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 ZNF496Q96IT1 587 aaPredicted RBP4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 DHRS4Q9BTZ2 278 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 MCOLN1Q9GZU1 580 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 BCAS3Q9H6U6 928 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 SRP68Q9UHB9 627 aaKnown RBP4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 NARFQ9UHQ1 456 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 SIT1Q9Y3P8 196 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 TRAF6Q9Y4K3 522 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 PTCH2Q9Y6C5 1203 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 C4AP0C0L4 1744 aa4.58□□□□□ -1.68
UBE2D3-226ENST00000508635 PXDNLA1KZ92 1463 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 C10orf71Q711Q0 1435 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 HEG1Q9ULI3 1381 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 MYH14Q7Z406 1995 aaKnown RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 GOLGB1Q14789 3259 aaKnown RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 A0A0G2JLW4 131 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 POLRMTO00411 1230 aaKnown RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 KCNQ3O43525 872 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 STARD3NLO95772 234 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 KRT1P04264 644 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 CYBBP04839 570 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 GLI4P10075 376 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 DPEP1P16444 411 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 KCNA3P22001 575 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 CANXP27824 592 aaKnown RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 EIF5P55010 431 aaKnown RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 TEFQ10587 303 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 LSAMPQ13449 338 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 RALBP1Q15311 655 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 WWC2Q6AWC2 1192 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 PAQR3Q6TCH7 311 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 MCM10Q7L590 875 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 SH3TC2Q8TF17 1288 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 THAP3Q8WTV1 239 aaPredicted RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 DCAF4Q8WV16 495 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 KCNN1Q92952 543 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 TMEM169Q96HH4 297 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 PLEKHF1Q96S99 279 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 TEX13AQ9BXU3 409 aaPredicted RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 GPR27Q9NS67 375 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 SIRT5Q9NXA8 310 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 CLDND1Q9NY35 253 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.57□□□□□ -1.685e-8■■■□□ 16.6
UBE2D3-226ENST00000508635 PPARGC1AQ9UBK2 798 aaKnown RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 ZBTB1Q9Y2K1 713 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 MRPS23Q9Y3D9 190 aaKnown RBP4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 NPFFR2Q9Y5X5 522 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 UBR2Q8IWV8 1755 aa4.57□□□□□ -1.68
UBE2D3-226ENST00000508635 COL15A1P39059 1388 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 KIAA1551Q9HCM1 1747 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 HTATSF1O43719 755 aaKnown RBP4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 GTF2A2P52657 109 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 NCKAP1LP55160 1127 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 SUMO1P63165 101 aaKnown RBP4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 YBX1P67809 324 aaKnown RBP4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 PRR5P85299 388 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 DCTN1Q14203 1278 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 NFIXQ14938 502 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 NR1I3Q14994 352 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 TESK1Q15569 626 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 PLEKHN1Q494U1 663 aaPredicted RBP4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 C2orf27AQ580R0 203 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 ZSWIM2Q8NEG5 633 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 JAM3Q9BX67 310 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 PLA2G2DQ9UNK4 145 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 KIF13BQ9NQT8 1826 aa4.56□□□□□ -1.68
UBE2D3-226ENST00000508635 ATP10DQ9P241 1426 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 SIPA1L3O60292 1781 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 ADCY9O60503 1353 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 CHD4Q14839 1912 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 PRAMEF22A3QJZ6 481 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 ETV2O00321 342 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 ABLIM1O14639 778 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 SRGAP3O43295 1099 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 IGSF3O75054 1194 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 A1BGP04217 495 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 SERPINB2P05120 415 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 SNRPA1P09661 255 aaKnown RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 C6orf222P0C671 652 aaPredicted RBP4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 TMEM253P0C7T8 217 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 CHRNA5P30532 468 aa4.55□□□□□ -1.68
UBE2D3-226ENST00000508635 IL6STP40189 918 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms