RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 HERC4Q5GLZ8 1057 aaPredicted RBP15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 IER5Q5VY09 327 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 FOXR2Q6PJQ5 311 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 COPS5Q92905 334 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 HVCN1Q96D96 273 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 PCDHB13Q9Y5F0 798 aa15.97■□□□□ 0.15
HMGCLL1-208ENST00000508459 ZSWIM8A7E2V4 1837 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 MYMKA6NI61 221 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 SMTNL1A8MU46 457 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 ZNF862O60290 1169 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 MAFO75444 373 aaPredicted RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 FGFR1OPO95684 399 aaKnown RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 ERCC5P28715 1186 aaPredicted RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 ZNF131P52739 623 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 SNRPFP62306 86 aaKnown RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 CUL4BQ13620 913 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 PLCB4Q15147 1175 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 UGCGQ16739 394 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 C7orf31Q8N865 590 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 GOLGA5Q8TBA6 731 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 MAP7D2Q96T17 732 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 C16orf70Q9BSU1 422 aa15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 GZF1Q9H116 711 aaPredicted RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 DHX33Q9H6R0 707 aaKnown RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 CGNQ9P2M7 1197 aaKnown RBP15.96■□□□□ 0.15
HMGCLL1-208ENST00000508459 KAT6AQ92794 2004 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 EIF3DO15371 548 aaKnown RBP eCLIP15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 MYL3P08590 195 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 PLS3P13797 630 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 EFNA5P52803 228 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 PSMC6P62333 389 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 PURAQ00577 322 aaKnown RBP15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 PPFIA1Q13136 1202 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 MORC3Q14149 939 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 GIT2Q14161 759 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 MFSD10Q14728 455 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 EMC2Q15006 297 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 PCBP1Q15365 356 aaKnown RBP eCLIP15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 TARBP2Q15633 366 aaKnown RBP15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 FAM26FQ5R3K3 315 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 TAF2Q6P1X5 1199 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 NFRKBQ6P4R8 1299 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 DYMQ7RTS9 669 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 KCNK18Q7Z418 384 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 RSPH3Q86UC2 560 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 TRPV1Q8NER1 839 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 SPIRE2Q8WWL2 714 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 PSPC1Q8WXF1 523 aaKnown RBP15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 DNAJC19Q96DA6 116 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 DHTKD1Q96HY7 919 aaPredicted RBP15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 GLT1D1Q96MS3 346 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 PCYT2Q99447 389 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 REEP2Q9BRK0 252 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 C2orf40Q9H1Z8 148 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 TSKSQ9UJT2 592 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 EXOC7Q9UPT5 735 aa15.95■□□□□ 0.14
HMGCLL1-208ENST00000508459 USO1O60763 962 aaKnown RBP15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 ADAMTS4O75173 837 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 PSEN2P49810 448 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 POU5F1BQ06416 359 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 KIAA0753Q2KHM9 967 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 KMT5BQ4FZB7 885 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 ODR4Q5SWX8 454 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 SESTD1Q86VW0 696 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 FAM178BQ8IXR5 827 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 NME8Q8N427 588 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 MYCT1Q8N699 235 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 ANKLE1Q8NAG6 615 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 KLHDC9Q8NEP7 349 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 KCNN1Q92952 543 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 ARMC5Q96C12 935 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 TSG101Q99816 390 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 ST6GALNAC4Q9H4F1 302 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 ZHX3Q9H4I2 956 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 TMEM206Q9H813 350 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 PAK6Q9NQU5 681 aaPredicted RBP15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 WRAP73Q9P2S5 460 aaPredicted RBP15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 MAN1B1Q9UKM7 699 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 ARID2Q68CP9 1835 aa15.94■□□□□ 0.14
HMGCLL1-208ENST00000508459 BECN2A8MW95 431 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 HAS3O00219 553 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 DNM1LO00429 736 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 FOXN1O15353 648 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 SORBS3O60504 671 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 STBD1O95210 358 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 CCND3P30281 292 aaPredicted RBP15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 NAMPTP43490 491 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 COASYQ13057 564 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 ARSHQ5FYA8 562 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 FAM102BQ5T8I3 360 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 MYOCDQ8IZQ8 938 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 GUF1Q8N442 669 aaKnown RBP15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 NTPCRQ9BSD7 190 aaKnown RBP15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 BLZF1Q9H2G9 400 aa15.93■□□□□ 0.14
HMGCLL1-208ENST00000508459 MRPL44Q9H9J2 332 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms