RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 MICAL3Q7RTP6 2002 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 GPR32O75388 356 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 MAFO75444 373 aaPredicted RBP22.26■■□□□ 1.15
SFXN1-209ENST00000508290 STAG3L1P0CL83 205 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 MCM7P33993 719 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 TXKP42681 527 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 CLCN3P51790 818 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 KIZQ2M2Z5 673 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 SUGCTQ9HAC7 445 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 ERVK-5Q9HDB9 667 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 C1orf112Q9NSG2 853 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 SMC3Q9UQE7 1217 aa22.26■■□□□ 1.15
SFXN1-209ENST00000508290 VTNP04004 478 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 POU3F3P20264 500 aaPredicted RBP22.25■■□□□ 1.15
SFXN1-209ENST00000508290 YWHABP31946 246 aaKnown RBP22.25■■□□□ 1.15
SFXN1-209ENST00000508290 NLRP11P59045 1033 aaKnown RBP22.25■■□□□ 1.15
SFXN1-209ENST00000508290 ERVK-21P61565 698 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 NFX1Q12986 1120 aaKnown RBP22.25■■□□□ 1.15
SFXN1-209ENST00000508290 TTC38Q5R3I4 469 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 ZNF410Q86VK4 478 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 NPAS4Q8IUM7 802 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 LRRC71Q8N4P6 559 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 CEP89Q96ST8 783 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 HSD17B14Q9BPX1 270 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 STK24Q9Y6E0 443 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 GBF1Q92538 1859 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 CHD9Q3L8U1 2897 aa22.25■■□□□ 1.15
SFXN1-209ENST00000508290 SIP14410 1827 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 LINC01553A4QN01 128 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 LAD1O00515 517 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 GTPBP6O43824 516 aaPredicted RBP22.24■■□□□ 1.15
SFXN1-209ENST00000508290 CD2BP2O95400 341 aaKnown RBP22.24■■□□□ 1.15
SFXN1-209ENST00000508290 OR52Z1P0C646 297 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 EIF4BP23588 611 aaKnown RBP22.24■■□□□ 1.15
SFXN1-209ENST00000508290 GPC3P51654 580 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 TMEM266Q2M3C6 531 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 FAM117BQ6P1L5 589 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 TMCO2Q7Z6W1 182 aaPredicted RBP22.24■■□□□ 1.15
SFXN1-209ENST00000508290 ERMNQ8TAM6 284 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 CEP170P1Q96L14 293 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 OSMRQ99650 979 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 EIF2AK1Q9BQI3 630 aaKnown RBP22.24■■□□□ 1.15
SFXN1-209ENST00000508290 INO80BQ9C086 356 aaPredicted RBP22.24■■□□□ 1.15
SFXN1-209ENST00000508290 ADAMTS10Q9H324 1103 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 ST3GAL5Q9UNP4 418 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 NOC2LQ9Y3T9 749 aaKnown RBP22.24■■□□□ 1.15
SFXN1-209ENST00000508290 RWDD3Q9Y3V2 267 aa22.24■■□□□ 1.15
SFXN1-209ENST00000508290 LCHNA4D1U4 455 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 H3BQV1 296 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 SLITRK3O94933 977 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 UPP2O95045 317 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 XRCC6P12956 609 aaKnown RBP eCLIP22.23■■□□□ 1.15
SFXN1-209ENST00000508290 ATP2B1P20020 1258 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 GJB2P29033 226 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 POLGP54098 1239 aaPredicted RBP22.23■■□□□ 1.15
SFXN1-209ENST00000508290 TMEM40Q8WWA1 233 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 TCP11Q8WWU5 503 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 ARNTL2Q8WYA1 636 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 DYDC2Q96IM9 177 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 SCLT1Q96NL6 688 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 RAB34Q9BZG1 259 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 DHX33Q9H6R0 707 aaKnown RBP22.23■■□□□ 1.15
SFXN1-209ENST00000508290 ANKEF1Q9NU02 776 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 LMCD1Q9NZU5 365 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 GTF3C3Q9Y5Q9 886 aa22.23■■□□□ 1.15
SFXN1-209ENST00000508290 PTPRSQ13332 1948 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 DENND3A2RUS2 1198 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 WNT7AO00755 349 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 DARSP14868 501 aaKnown RBP22.22■■□□□ 1.15
SFXN1-209ENST00000508290 RILPL1Q5EBL4 403 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 SLC24A5Q71RS6 500 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 TPH2Q8IWU9 490 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 NLRP7Q8WX94 980 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 CCDC43Q96MW1 224 aaKnown RBP22.22■■□□□ 1.15
SFXN1-209ENST00000508290 GCOM2Q9BZD3 368 aaPredicted RBP22.22■■□□□ 1.15
SFXN1-209ENST00000508290 CDHR5Q9HBB8 845 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 TUFT1Q9NNX1 390 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 RGS18Q9NS28 235 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 RGL1Q9NZL6 768 aa22.22■■□□□ 1.15
SFXN1-209ENST00000508290 SUCLA2Q9P2R7 463 aaPredicted RBP22.22■■□□□ 1.15
SFXN1-209ENST00000508290 MUTP22033 750 aa22.21■■□□□ 1.15
SFXN1-209ENST00000508290 SARSP49591 514 aaKnown RBP22.21■■□□□ 1.15
SFXN1-209ENST00000508290 CYP4A11Q02928 519 aa22.21■■□□□ 1.15
SFXN1-209ENST00000508290 HAUS3Q68CZ6 603 aa22.21■■□□□ 1.15
SFXN1-209ENST00000508290 FAM228AQ86W67 206 aa22.21■■□□□ 1.15
SFXN1-209ENST00000508290 TMEM60Q9H2L4 133 aa22.21■■□□□ 1.15
SFXN1-209ENST00000508290 WRAP73Q9P2S5 460 aaPredicted RBP22.21■■□□□ 1.15
SFXN1-209ENST00000508290 ADGRA3Q8IWK6 1321 aa22.21■■□□□ 1.15
SFXN1-209ENST00000508290 CDH23Q9H251 3354 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 WDR81Q562E7 1941 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 ASAP2O43150 1006 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 DGKIO75912 1065 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 ZSCAN20P17040 1043 aaPredicted RBP22.2■■□□□ 1.14
SFXN1-209ENST00000508290 PDCP20941 246 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 IGFBP4P22692 258 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 CUL4AQ13619 759 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 ADGRE1Q14246 886 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 CTTNQ14247 550 aaKnown RBP22.2■■□□□ 1.14
SFXN1-209ENST00000508290 ZNF174Q15697 407 aa22.2■■□□□ 1.14
SFXN1-209ENST00000508290 XKR9Q5GH70 373 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms