RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 CASKIN2Q8WXE0 1202 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 CAVIN3Q969G5 261 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 ZIM3Q96PE6 472 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 SH3GL2Q99962 352 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 GLIS2Q9BZE0 524 aaPredicted RBP11.93□□□□□ -0.5
LIN54-207ENST00000508171 UNC45AQ9H3U1 944 aa11.93□□□□□ -0.5
LIN54-207ENST00000508171 CWC15Q9P013 229 aaKnown RBP11.93□□□□□ -0.5
LIN54-207ENST00000508171 HERC5Q9UII4 1024 aaKnown RBP11.93□□□□□ -0.5
LIN54-207ENST00000508171 RBBP6Q7Z6E9 1792 aaKnown RBP11.92□□□□□ -0.5
LIN54-207ENST00000508171 EVI5O60447 810 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 RAD17O75943 681 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 KRT14P02533 472 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 PRELPP51888 382 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 PLS1Q14651 629 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 CBWD6Q4V339 395 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 CBWD3Q5JTY5 395 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 CBWD5Q5RIA9 395 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 BANK1Q8NDB2 785 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 FLAD1Q8NFF5 587 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 TPCN2Q8NHX9 752 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
LIN54-207ENST00000508171 TAF4BQ92750 862 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 TMEM59LQ9UK28 342 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 FBXL5Q9UKA1 691 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 NENFQ9UMX5 172 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 TMCO5BA8MYB1 307 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 DDX39AO00148 427 aaKnown RBP11.92□□□□□ -0.5
LIN54-207ENST00000508171 EIF3DO15371 548 aaKnown RBP eCLIP11.92□□□□□ -0.5
LIN54-207ENST00000508171 CEP104O60308 925 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 FLOT1O75955 427 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 IVLP07476 585 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 VIL1P09327 827 aaKnown RBP11.92□□□□□ -0.5
LIN54-207ENST00000508171 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 TRIM49P0CI25 452 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 TRIM49CP0CI26 452 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 SLC15A2Q16348 729 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 TTMPQ5BVD1 217 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 DNAJC21Q5F1R6 531 aaKnown RBP11.92□□□□□ -0.5
LIN54-207ENST00000508171 ODR4Q5SWX8 454 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 TTC19Q6DKK2 380 aaPredicted RBP11.92□□□□□ -0.5
LIN54-207ENST00000508171 MAEAQ7L5Y9 396 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 FAM178BQ8IXR5 827 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 AP1M1Q9BXS5 423 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 GOPCQ9HD26 462 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 PKD2L1Q9P0L9 805 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 RSPH14Q9UHP6 348 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 ZBTB21Q9ULJ3 1066 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
LIN54-207ENST00000508171 ZBTB12Q9Y330 459 aaPredicted RBP11.92□□□□□ -0.5
LIN54-207ENST00000508171 GTPBP10A4D1E9 387 aaKnown RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 FMO5P49326 533 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 METTL13Q8N6R0 699 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 CNKSR1Q969H4 720 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 CCDC43Q96MW1 224 aaKnown RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 RANBP17Q9H2T7 1088 aaKnown RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 ZNF70Q9UC06 446 aaPredicted RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 TRIM66O15016 1216 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 HSF2BPO75031 334 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 H2AFZP0C0S5 128 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 GALCP54803 685 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 ALS2CLQ60I27 953 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 KCTD16Q68DU8 428 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 H2AFVQ71UI9 128 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 GLYCTKQ8IVS8 523 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 IQCKQ8N0W5 287 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 LNX1Q8TBB1 728 aaPredicted RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 NACC1Q96RE7 527 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 TMEM39BQ9GZU3 492 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 RABEP2Q9H5N1 569 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 OSGEPQ9NPF4 335 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 AGPAT3Q9NRZ7 376 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 DNAJC12Q9UKB3 198 aa11.91□□□□□ -0.5
LIN54-207ENST00000508171 SCAF8Q9UPN6 1271 aaKnown RBP11.91□□□□□ -0.5
LIN54-207ENST00000508171 ANKRD65E5RJM6 399 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 F8VZ95 297 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 IPO5O00410 1097 aaKnown RBP11.9□□□□□ -0.5
LIN54-207ENST00000508171 OPA1O60313 960 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 STAT1P42224 750 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 ZNF131P52739 623 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 DAAM2Q86T65 1068 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 CHURC1Q8WUH1 139 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 PIK3R5Q8WYR1 880 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 LXNQ9BS40 222 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 GPR88Q9GZN0 384 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 VEZTQ9HBM0 779 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 TMOD2Q9NZR1 351 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 RRP15Q9Y3B9 282 aaKnown RBP11.9□□□□□ -0.5
LIN54-207ENST00000508171 CNTNAP1P78357 1384 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 FRMPD4Q14CM0 1322 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 ZNF233A6NK53 670 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 TISP43B9A030 160 aa11.9□□□□□ -0.5
LIN54-207ENST00000508171 MYO1CO00159 1063 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms