RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 RWDD2AQ9UIY3 292 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 TBC1D30Q9Y2I9 924 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 SCN9AQ15858 1988 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 MYH7BA7E2Y1 1941 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 MYH1P12882 1939 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 A0A1W2PQJ5 194 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 WNT7AO00755 349 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 KRT16P08779 473 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 SLURP2P0DP57 97 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 HNRNPH3P31942 346 aaKnown RBP6.66□□□□□ -1.34
KDM3B-204ENST00000507996 PAFAH1B1P43034 410 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 GJA8P48165 433 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 PEX5P50542 639 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 RHBDL3P58872 404 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 NFIAQ12857 509 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 KBTBD12Q3ZCT8 623 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 USH1GQ495M9 461 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 TCP11X2Q5H9J9 407 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 CDC42EP5Q6NZY7 148 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 TMEM154Q6P9G4 183 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 KCTD17Q8N5Z5 321 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 ZNF507Q8TCN5 953 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 PRMT6Q96LA8 375 aaPredicted RBP6.66□□□□□ -1.34
KDM3B-204ENST00000507996 RNF41Q9H4P4 317 aaPredicted RBP6.66□□□□□ -1.34
KDM3B-204ENST00000507996 RBM12Q9NTZ6 932 aaKnown RBP6.66□□□□□ -1.34
KDM3B-204ENST00000507996 CTTNBP2NLQ9P2B4 639 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 PDP2Q9P2J9 529 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 TUBGCP4Q9UGJ1 667 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 TMEM59LQ9UK28 342 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 HDAC9Q9UKV0 1011 aa6.66□□□□□ -1.34
KDM3B-204ENST00000507996 NID2Q14112 1375 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 FLT1P17948 1338 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 KLF18A0A0U1RQI7 1052 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 TSPY2A6NKD2 308 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 SIGLEC16A6NMB1 481 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 PHF20L1A8MW92 1017 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 IGF2BP3O00425 579 aaKnown RBP eCLIP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 HEXIM1O94992 359 aaKnown RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 EIF6P56537 245 aaKnown RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 ANTXR2P58335 489 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 PPP4CP60510 307 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 MPP3Q13368 585 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 LSAMPQ13449 338 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 BTG3Q14201 252 aaPredicted RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 FIGNQ5HY92 759 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 TMEM67Q5HYA8 995 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 SH2D4BQ5SQS7 431 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 DAB2IPQ5VWQ8 1189 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 APOBEC3HQ6NTF7 200 aaKnown RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 MB21D2Q8IYB1 491 aaPredicted RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 SYCP3Q8IZU3 236 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 CCDC82Q8N4S0 544 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 ZBTB8BQ8NAP8 495 aaPredicted RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 FBF1Q8TES7 1133 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 KCNN1Q92952 543 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 RAB3IPQ96QF0 476 aaPredicted RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 UBAC1Q9BSL1 405 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 MYL10Q9BUA6 226 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 NSRP1Q9H0G5 558 aaKnown RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 ECT2Q9H8V3 914 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 PCDH18Q9HCL0 1135 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 PREBQ9HCU5 417 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 DDX4Q9NQI0 724 aaKnown RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 ARPP21Q9UBL0 812 aaPredicted RBP6.65□□□□□ -1.34
KDM3B-204ENST00000507996 SERTAD1Q9UHV2 236 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 TMEM98Q9Y2Y6 226 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 SUGT1Q9Y2Z0 365 aa6.65□□□□□ -1.34
KDM3B-204ENST00000507996 SNED1Q8TER0 1413 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 DLEC1Q9Y238 1755 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 KIAA1551Q9HCM1 1747 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 GAKO14976 1311 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 TTC26A0AVF1 554 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 LGALS16A8MUM7 142 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 TCP10L2B9ZVM9 353 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 HIP1RO75146 1068 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 GJB6O95452 261 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 TMOD1P28289 359 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 HPDP32754 393 aaPredicted RBP6.65□□□□□ -1.35
KDM3B-204ENST00000507996 PRELPP51888 382 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 EIF3BP55884 814 aaKnown RBP6.65□□□□□ -1.35
KDM3B-204ENST00000507996 DLGAP5Q15398 846 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 GPR162Q16538 588 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 TSNAXIP1Q2TAA8 658 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 CFAP221Q4G0U5 840 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 HHIPL2Q6UWX4 724 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 ZFPM1Q8IX07 1006 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 STK32AQ8WU08 396 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 RSPH1Q8WYR4 309 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 ESR2Q92731 530 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 RPS6KC1Q96S38 1066 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 SMC6Q96SB8 1091 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 CNNM2Q9H8M5 875 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 CYP39A1Q9NYL5 469 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 LRCH1Q9Y2L9 728 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 LUC7L2Q9Y383 392 aaKnown RBP6.65□□□□□ -1.35
KDM3B-204ENST00000507996 BZW2Q9Y6E2 419 aaKnown RBP6.65□□□□□ -1.35
KDM3B-204ENST00000507996 COMMD3-BMI1R4GMX3 469 aa6.65□□□□□ -1.35
KDM3B-204ENST00000507996 COL4A5P29400 1685 aa6.64□□□□□ -1.35
KDM3B-204ENST00000507996 STK36Q9NRP7 1315 aa6.64□□□□□ -1.35
KDM3B-204ENST00000507996 KIF13BQ9NQT8 1826 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms