RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 RAVER2Q9HCJ3 691 aaKnown RBP24.07■■□□□ 1.44
SPCS3-203ENST00000507678 EGFRP00533 1210 aa24.07■■□□□ 1.44
SPCS3-203ENST00000507678 CXCL9Q07325 125 aa24.07■■□□□ 1.44
SPCS3-203ENST00000507678 ARHGAP27Q6ZUM4 889 aa24.07■■□□□ 1.44
SPCS3-203ENST00000507678 CAMKK2Q96RR4 588 aa24.07■■□□□ 1.44
SPCS3-203ENST00000507678 COL2A1P02458 1487 aaPredicted RBP24.07■■□□□ 1.44
SPCS3-203ENST00000507678 ZNRF3Q9ULT6 936 aa24.07■■□□□ 1.44
SPCS3-203ENST00000507678 SYNPO2Q9UMS6 1093 aa24.07■■□□□ 1.44
SPCS3-203ENST00000507678 TMEM150BA6NC51 233 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 TMCO5BA8MYB1 307 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 HIP1RO75146 1068 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 ASNSP08243 561 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 PRLRP16471 622 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 PSMC2P35998 433 aaKnown RBP24.06■■□□□ 1.44
SPCS3-203ENST00000507678 RASA3Q14644 834 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
SPCS3-203ENST00000507678 HS2ST1Q7LGA3 356 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 ZNF720Q7Z2F6 126 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 PSMD1Q99460 953 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 SIX2Q9NPC8 291 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 PLCB1Q9NQ66 1216 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 KCNH7Q9NS40 1196 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 TISP43B9A030 160 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 ALKBH5Q6P6C2 394 aaKnown RBP24.06■■□□□ 1.44
SPCS3-203ENST00000507678 MIER3Q7Z3K6 550 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 MMGT1Q8N4V1 131 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 MXRA8Q9BRK3 442 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 ACBD3Q9H3P7 528 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 PCIF1Q9H4Z3 704 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.06■■□□□ 1.443e-13■■■■■ 574.5
SPCS3-203ENST00000507678 HPCAL4Q9UM19 191 aa24.06■■□□□ 1.44
SPCS3-203ENST00000507678 GRID2IPA4D2P6 1211 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 PPP1R12BO60237 982 aaPredicted RBP24.05■■□□□ 1.44
SPCS3-203ENST00000507678 KCNA3P22001 575 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 CFAP221Q4G0U5 840 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 C8orf74Q6P047 294 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 SND1Q7KZF4 910 aaKnown RBP eCLIP24.05■■□□□ 1.443e-12■■□□□ 11.5
SPCS3-203ENST00000507678 TSPYL1Q9H0U9 437 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 SLC16A3O15427 465 aaKnown RBP24.05■■□□□ 1.44
SPCS3-203ENST00000507678 EIF2AK2P19525 551 aaKnown RBP24.05■■□□□ 1.44
SPCS3-203ENST00000507678 DEFB132Q7Z7B7 95 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 FIZ1Q96SL8 496 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 PPP1R1BQ9UD71 204 aaPredicted RBP24.05■■□□□ 1.44
SPCS3-203ENST00000507678 NAGPAQ9UK23 515 aa24.05■■□□□ 1.44
SPCS3-203ENST00000507678 FRMPD4Q14CM0 1322 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 CBWD6Q4V339 395 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 CBWD3Q5JTY5 395 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 CBWD5Q5RIA9 395 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 AGPAT3Q9NRZ7 376 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 FRMD4BQ9Y2L6 1034 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 ZNF536O15090 1300 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 ESYT3A0FGR9 886 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 ZSCAN5CA6NGD5 496 aaPredicted RBP24.04■■□□□ 1.44
SPCS3-203ENST00000507678 K7ENM7 598 aa24.04■■□□□ 1.44
SPCS3-203ENST00000507678 SETQ01105 290 aaPredicted RBP24.04■■□□□ 1.44
SPCS3-203ENST00000507678 EIF3DO15371 548 aaKnown RBP eCLIP24.03■■□□□ 1.44
SPCS3-203ENST00000507678 EXOC3O60645 756 aa24.03■■□□□ 1.44
SPCS3-203ENST00000507678 MYCLP12524 364 aaPredicted RBP24.03■■□□□ 1.44
SPCS3-203ENST00000507678 MUM1L1Q5H9M0 696 aa24.03■■□□□ 1.44
SPCS3-203ENST00000507678 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.03■■□□□ 1.44
SPCS3-203ENST00000507678 U2AF1L4Q8WU68 220 aaKnown RBP24.03■■□□□ 1.44
SPCS3-203ENST00000507678 ICAM1P05362 532 aa24.03■■□□□ 1.44
SPCS3-203ENST00000507678 ARHGAP44Q17R89 818 aa24.03■■□□□ 1.44
SPCS3-203ENST00000507678 PADI6Q6TGC4 694 aa24.03■■□□□ 1.44
SPCS3-203ENST00000507678 MYOZ2Q9NPC6 264 aa24.03■■□□□ 1.44
SPCS3-203ENST00000507678 SEPT11Q9NVA2 429 aaKnown RBP24.03■■□□□ 1.44
SPCS3-203ENST00000507678 KCNK3O14649 394 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 RNF40O75150 1001 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 FLOT1O75955 427 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 GGCXP38435 758 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 PTGER2P43116 358 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 FMO5P49326 533 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 DAW1Q8N136 415 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 BORCS6Q96GS4 357 aa24.02■■□□□ 1.44
SPCS3-203ENST00000507678 MEI1Q5TIA1 1274 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 FAM83AQ86UY5 434 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 FAM71BQ8TC56 605 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 IFT81Q8WYA0 676 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 CCDC43Q96MW1 224 aaKnown RBP24.01■■□□□ 1.43
SPCS3-203ENST00000507678 KRT12Q99456 494 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 FAM204AQ9H8W3 233 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 STIM2Q9P246 746 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 PCDHGC5Q9Y5F6 944 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 ASTN2O75129 1339 aaPredicted RBP24.01■■□□□ 1.43
SPCS3-203ENST00000507678 TBC1D12O60347 775 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 EVI5O60447 810 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 ITGB3BPQ13352 177 aaPredicted RBP24.01■■□□□ 1.43
SPCS3-203ENST00000507678 PRPF38AQ8NAV1 312 aaKnown RBP24.01■■□□□ 1.43
SPCS3-203ENST00000507678 PROCA1Q8NCQ7 364 aaPredicted RBP24.01■■□□□ 1.43
SPCS3-203ENST00000507678 TSKSQ9UJT2 592 aa24.01■■□□□ 1.43
SPCS3-203ENST00000507678 LRRN2O75325 713 aa24■■□□□ 1.43
SPCS3-203ENST00000507678 SYF2O95926 243 aaKnown RBP24■■□□□ 1.43
SPCS3-203ENST00000507678 GLYCTKQ8IVS8 523 aa24■■□□□ 1.43
SPCS3-203ENST00000507678 KLHL7Q8IXQ5 586 aa24■■□□□ 1.43
SPCS3-203ENST00000507678 CLEC4DQ8WXI8 215 aa24■■□□□ 1.43
SPCS3-203ENST00000507678 TAF4BQ92750 862 aa24■■□□□ 1.43
SPCS3-203ENST00000507678 DNAJC12Q9UKB3 198 aa24■■□□□ 1.43
SPCS3-203ENST00000507678 FZD1Q9UP38 647 aa24■■□□□ 1.43
SPCS3-203ENST00000507678 CTDP1Q9Y5B0 961 aaPredicted RBP24■■□□□ 1.43
SPCS3-203ENST00000507678 ZHX2Q9Y6X8 837 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms