RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 SORCS3Q9UPU3 1222 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 NR2E1Q9Y466 385 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 GVINP1Q7Z2Y8 2422 aa18.76■□□□□ 0.59
SNF8-205ENST00000507302 DHX15O43143 795 aaKnown RBP18.75■□□□□ 0.59
SNF8-205ENST00000507302 FGFR1P11362 822 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 ATP4AP20648 1035 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 APOBRQ0VD83 1088 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 ZNF484Q5JVG2 852 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 PLPP4Q5VZY2 271 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 TYW1BQ6NUM6 668 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 ASCL5Q7RTU5 278 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 CCDC60Q8IWA6 550 aaPredicted RBP18.75■□□□□ 0.59
SNF8-205ENST00000507302 KREMEN2Q8NCW0 462 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 NECTIN4Q96NY8 510 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 ADAM7Q9H2U9 754 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 ATP6V0A4Q9HBG4 840 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 RIC8AQ9NPQ8 531 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 PUF60Q9UHX1 559 aaKnown RBP18.75■□□□□ 0.59
SNF8-205ENST00000507302 WDR87Q6ZQQ6 2873 aa18.75■□□□□ 0.59
SNF8-205ENST00000507302 PRR23AA6NEV1 266 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 PRC1O43663 620 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 C22orf31O95567 290 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 BRD1O95696 1058 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 FOSP01100 380 aaPredicted RBP18.74■□□□□ 0.59
SNF8-205ENST00000507302 PPM1AP35813 382 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 CLK2P49760 499 aaKnown RBP18.74■□□□□ 0.59
SNF8-205ENST00000507302 ITIH3Q06033 890 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 MTMR3Q13615 1198 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 KCNT2Q6UVM3 1135 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 TMEM105Q8N8V8 129 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 CRYGNQ8WXF5 182 aa18.74■□□□□ 0.59
SNF8-205ENST00000507302 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 C2CD4DB7Z1M9 353 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 HOXA2O43364 376 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 MCM5P33992 734 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 SREBF1P36956 1147 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 TPRNQ4KMQ1 711 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 WWC2Q6AWC2 1192 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 PPP1R18Q6NYC8 613 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 SGMS1Q86VZ5 419 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 LINC01465Q8N7H1 131 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 MRPL43Q8N983 215 aaKnown RBP18.73■□□□□ 0.59
SNF8-205ENST00000507302 FANCBQ8NB91 859 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 CASP10Q92851 521 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 POMKQ9H5K3 350 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 CDH22Q9UJ99 828 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 MAFBQ9Y5Q3 323 aaPredicted RBP18.73■□□□□ 0.59
SNF8-205ENST00000507302 RBM8AQ9Y5S9 174 aaKnown RBP18.73■□□□□ 0.59
SNF8-205ENST00000507302 HCFC2Q9Y5Z7 792 aa18.73■□□□□ 0.59
SNF8-205ENST00000507302 C2orf71A6NGG8 1288 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 RXRAP19793 462 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 FUT2Q10981 343 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 KIZQ2M2Z5 673 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 FAM160B1Q5W0V3 765 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 ZDHHC14Q8IZN3 488 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 LRRC43Q8N309 656 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 ZNF558Q96NG5 402 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 OSMRQ99650 979 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 ANO3Q9BYT9 981 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 ENTPD7Q9NQZ7 604 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 GINS2Q9Y248 185 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 CNTNAP5Q8WYK1 1306 aa18.72■□□□□ 0.59
SNF8-205ENST00000507302 IGLV3-22A0A075B6J6 115 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 LLGL2Q6P1M3 1020 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 HEATR3Q7Z4Q2 680 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 SLC39A11Q8N1S5 342 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 ZNF710Q8N1W2 664 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 BBXQ8WY36 941 aaPredicted RBP18.71■□□□□ 0.59
SNF8-205ENST00000507302 ADAMTS10Q9H324 1103 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 ZNF302Q9NR11 478 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 SPG21Q9NZD8 308 aa18.71■□□□□ 0.59
SNF8-205ENST00000507302 FAM86B1E9PN63 330 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 CLASP2O75122 1294 aaKnown RBP18.7■□□□□ 0.58
SNF8-205ENST00000507302 FAM86B2P0C5J1 330 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 MTHFRP42898 656 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 CLCN5P51795 746 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 KRT17Q04695 432 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 AP3B2Q13367 1082 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 SMC1AQ14683 1233 aaKnown RBP18.7■□□□□ 0.58
SNF8-205ENST00000507302 CLLU1OSQ5K130 101 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 ASTLQ6HA08 431 aaPredicted RBP18.7■□□□□ 0.58
SNF8-205ENST00000507302 PDXDC2PQ6P474 469 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 ZNF598Q86UK7 904 aaKnown RBP18.7■□□□□ 0.58
SNF8-205ENST00000507302 ECHDC2Q86YB7 292 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 APOL5Q9BWW9 433 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 USTQ9Y2C2 406 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 IRAK3Q9Y616 596 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
SNF8-205ENST00000507302 hCG_1984214I3L0E3 225 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 CYP3A4P08684 503 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 CES5AQ6NT32 575 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 SWSAP1Q6NVH7 229 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 NFXL1Q6ZNB6 911 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 TMC7Q7Z402 723 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 ZBTB33Q86T24 672 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 CCDC82Q8N4S0 544 aa18.69■□□□□ 0.58
SNF8-205ENST00000507302 ZNF713Q8N859 430 aaPredicted RBP18.69■□□□□ 0.58
SNF8-205ENST00000507302 PGBD1Q96JS3 809 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms