RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 XRCC5P13010 732 aaKnown RBP19.26■□□□□ 0.67
NUP54-205ENST00000507257 RPS8P62241 208 aaKnown RBP19.26■□□□□ 0.67
NUP54-205ENST00000507257 LMNB2Q03252 620 aa19.26■□□□□ 0.67
NUP54-205ENST00000507257 ASPRV1Q53RT3 343 aa19.26■□□□□ 0.67
NUP54-205ENST00000507257 LRRC34Q8IZ02 419 aa19.26■□□□□ 0.67
NUP54-205ENST00000507257 L3MBTL3Q96JM7 780 aaPredicted RBP19.26■□□□□ 0.67
NUP54-205ENST00000507257 LRRC4CQ9HCJ2 640 aa19.26■□□□□ 0.67
NUP54-205ENST00000507257 PLIN4Q96Q06 1357 aa19.26■□□□□ 0.67
NUP54-205ENST00000507257 RGS16O15492 202 aaPredicted RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 ATP2C2O75185 946 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 LDHBP07195 334 aaKnown RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 LDHCP07864 332 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 LMNB1P20700 586 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 CDK8P49336 464 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 PLS1Q14651 629 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 KIAA1755Q5JYT7 1200 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 MFSD5Q6N075 450 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 C10orf71Q711Q0 1435 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 EPM2AIP1Q7L775 607 aaPredicted RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 GPBP1Q86WP2 473 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 PLCD4Q9BRC7 762 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 TRIM51Q9BSJ1 452 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 KANSL2Q9H9L4 492 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 PCDHA12Q9UN75 941 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 MTMR7Q9Y216 660 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 KIAA0391O15091 583 aaKnown RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 PDE6CP51160 858 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 GALCP54803 685 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 HADHBP55084 474 aaKnown RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 IRX1P78414 480 aaPredicted RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 MAPK7Q13164 816 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 BMT2Q1RMZ1 405 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 SLC4A8Q2Y0W8 1093 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 GALNTL6Q49A17 601 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 ZDHHC24Q6UX98 284 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 OLIG1Q8TAK6 271 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 RNF25Q96BH1 459 aaPredicted RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 TFCP2L1Q9NZI6 479 aa19.25■□□□□ 0.67
NUP54-205ENST00000507257 NOP53Q9NZM5 478 aaKnown RBP19.25■□□□□ 0.67
NUP54-205ENST00000507257 CALUO43852 315 aaPredicted RBP19.24■□□□□ 0.67
NUP54-205ENST00000507257 SNX3O60493 162 aa19.24■□□□□ 0.67
NUP54-205ENST00000507257 SHBGP04278 402 aa19.24■□□□□ 0.67
NUP54-205ENST00000507257 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
NUP54-205ENST00000507257 NQO1P15559 274 aaKnown RBP19.24■□□□□ 0.67
NUP54-205ENST00000507257 ZKSCAN8Q15776 578 aaPredicted RBP19.24■□□□□ 0.67
NUP54-205ENST00000507257 KNOP1Q1ED39 458 aaKnown RBP19.24■□□□□ 0.67
NUP54-205ENST00000507257 ANKRD27Q96NW4 1050 aa19.24■□□□□ 0.67
NUP54-205ENST00000507257 SELENOSQ9BQE4 189 aa19.24■□□□□ 0.67
NUP54-205ENST00000507257 COL5A3P25940 1745 aaPredicted RBP19.24■□□□□ 0.67
NUP54-205ENST00000507257 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
NUP54-205ENST00000507257 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 PODXLO00592 558 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 CCND1P24385 295 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 CALRP27797 417 aaKnown RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 STAT1P42224 750 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 SLC12A3P55017 1021 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 SIK1P57059 783 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 DCAF12L1Q5VU92 463 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 TAOK1Q7L7X3 1001 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 JAMLQ86YT9 394 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 PROCA1Q8NCQ7 364 aaPredicted RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 NSMCE1Q8WV22 266 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 SYT11Q9BT88 431 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 ROPN1BQ9BZX4 212 aaPredicted RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 ROPN1Q9HAT0 212 aaPredicted RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 VAT1LQ9HCJ6 419 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 TBC1D7Q9P0N9 293 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 ZNF831Q5JPB2 1677 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 RPTORQ8N122 1335 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 SPDYE3A6NKU9 549 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 E9PMD0 336 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 LIN7AO14910 233 aaPredicted RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 RPL13P26373 211 aaKnown RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 CHRNA3P32297 505 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 TCEAL1Q15170 157 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 ACCSLQ4AC99 568 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 U2AF1L4Q8WU68 220 aaKnown RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 TGFBRAP1Q8WUH2 860 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 STAMBPL1Q96FJ0 436 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 CEP95Q96GE4 821 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 MTRF1LQ9UGC7 380 aaKnown RBP19.23■□□□□ 0.67
NUP54-205ENST00000507257 PCYOX1Q9UHG3 505 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 KIAA1024Q9UPX6 916 aa19.23■□□□□ 0.67
NUP54-205ENST00000507257 O00370 1275 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 PHF2O75151 1096 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 GGPS1O95749 300 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 PTGIRP43119 386 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 NCALDP61601 193 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 NAA25Q14CX7 972 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 LNX1Q8TBB1 728 aaPredicted RBP19.22■□□□□ 0.67
NUP54-205ENST00000507257 SLC35G2Q8TBE7 412 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 TCP11Q8WWU5 503 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 RUNDC3BQ96NL0 473 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 ELAC2Q9BQ52 826 aaKnown RBP19.22■□□□□ 0.67
NUP54-205ENST00000507257 TYW1Q9NV66 732 aaKnown RBP19.22■□□□□ 0.67
NUP54-205ENST00000507257 GRHL1Q9NZI5 618 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 NR2E1Q9Y466 385 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 SBF2Q86WG5 1849 aa19.22■□□□□ 0.67
NUP54-205ENST00000507257 SYNGAP1Q96PV0 1343 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms