RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 FOXP1Q9H334 677 aaPredicted RBP17.48■□□□□ 0.39
CLDND1-211ENST00000506575 CDHR5Q9HBB8 845 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 PCDHA12Q9UN75 941 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 NOC2LQ9Y3T9 749 aaKnown RBP17.48■□□□□ 0.39
CLDND1-211ENST00000506575 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 TTC3P53804 2025 aa17.48■□□□□ 0.39
CLDND1-211ENST00000506575 UNC80Q8N2C7 3258 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 EPOPA6NHQ4 379 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 GPR182O15218 404 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 DNM2P50570 870 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 NLRP11P59045 1033 aaKnown RBP17.47■□□□□ 0.39
CLDND1-211ENST00000506575 ERVK-21P61565 698 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 EPHA7Q15375 998 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 TARBP2Q15633 366 aaKnown RBP17.47■□□□□ 0.39
CLDND1-211ENST00000506575 CCDC85BQ15834 202 aaPredicted RBP17.47■□□□□ 0.39
CLDND1-211ENST00000506575 SPRED2Q7Z698 418 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 LINC01465Q8N7H1 131 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 JPH2Q9BR39 696 aaPredicted RBP17.47■□□□□ 0.39
CLDND1-211ENST00000506575 PRUNE2Q8WUY3 3088 aa17.47■□□□□ 0.39
CLDND1-211ENST00000506575 COL4A4P53420 1690 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-211ENST00000506575 PRRC2BQ5JSZ5 2229 aaKnown RBP17.46■□□□□ 0.39
CLDND1-211ENST00000506575 A0A0C4DFX4 3053 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 DENND3A2RUS2 1198 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 TMEM150BA6NC51 233 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 GPR32O75388 356 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 STAG3L1P0CL83 205 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 TXKP42681 527 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 MCM2P49736 904 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 ANO5Q75V66 913 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 TMEM40Q8WWA1 233 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 LINC01599Q8WXQ3 324 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 SAMD11Q96NU1 681 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 SH2D3AQ9BRG2 576 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 LXNQ9BS40 222 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-211ENST00000506575 ERVK-5Q9HDB9 667 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 ST3GAL5Q9UNP4 418 aa17.46■□□□□ 0.39
CLDND1-211ENST00000506575 NLRC5Q86WI3 1866 aa17.46■□□□□ 0.38
CLDND1-211ENST00000506575 STBD1O95210 358 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 MCM7P33993 719 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 CDC42EP1Q00587 391 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 SPIRE1Q08AE8 756 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 GRB10Q13322 594 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 PLA2G4FQ68DD2 849 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 OTUD6AQ7L8S5 288 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 RTN4RL1Q86UN2 441 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-211ENST00000506575 NPAS4Q8IUM7 802 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 EXOC8Q8IYI6 725 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 FBXO22Q8NEZ5 403 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 GDPD5Q8WTR4 605 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 NLRP7Q8WX94 980 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 DYDC2Q96IM9 177 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 TMX3Q96JJ7 454 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 ZSWIM4Q9H7M6 989 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 TTC12Q9H892 705 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-211ENST00000506575 CYP26B1Q9NR63 512 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-211ENST00000506575 LRFN2Q9ULH4 789 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 ADGRA3Q8IWK6 1321 aa17.45■□□□□ 0.38
CLDND1-211ENST00000506575 WNT7AO00755 349 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 MAFO75444 373 aaPredicted RBP17.44■□□□□ 0.38
CLDND1-211ENST00000506575 POU3F3P20264 500 aaPredicted RBP17.44■□□□□ 0.38
CLDND1-211ENST00000506575 IBSPP21815 317 aaPredicted RBP17.44■□□□□ 0.38
CLDND1-211ENST00000506575 GPC3P51654 580 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 FAM228AQ86W67 206 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 TPH2Q8IWU9 490 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 C4orf19Q8IY42 314 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 SLC7A3Q8WY07 619 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 ZNF668Q96K58 619 aaPredicted RBP17.44■□□□□ 0.38
CLDND1-211ENST00000506575 CEP170P1Q96L14 293 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 TMX1Q9H3N1 280 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 RGL1Q9NZL6 768 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 NOL7Q9UMY1 257 aaKnown RBP17.44■□□□□ 0.38
CLDND1-211ENST00000506575 PPME1Q9Y570 386 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 MTCH2Q9Y6C9 303 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 RALGAPA2Q2PPJ7 1873 aa17.44■□□□□ 0.38
CLDND1-211ENST00000506575 EIF4BP23588 611 aaKnown RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 YWHABP31946 246 aaKnown RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 POLGP54098 1239 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 ORC2Q13416 577 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 BTG3Q14201 252 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 CTTNQ14247 550 aaKnown RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 NEK9Q8TD19 979 aa17.43■□□□□ 0.38
CLDND1-211ENST00000506575 CEP89Q96ST8 783 aa17.43■□□□□ 0.38
CLDND1-211ENST00000506575 ADAM2Q99965 735 aa17.43■□□□□ 0.38
CLDND1-211ENST00000506575 EIF2AK1Q9BQI3 630 aaKnown RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 C1orf112Q9NSG2 853 aa17.43■□□□□ 0.38
CLDND1-211ENST00000506575 SUCLA2Q9P2R7 463 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 WRAP73Q9P2S5 460 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-211ENST00000506575 CUL9Q8IWT3 2517 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 IGKV6-21A0A0C4DH24 114 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 MGEA5O60502 916 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms