RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 CBX8Q9HC52 389 aa15.48■□□□□ 0.07
SERF1B-204ENST00000506542 KBTBD4Q9NVX7 518 aa15.48■□□□□ 0.07
SERF1B-204ENST00000506542 CHD7Q9P2D1 2997 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 NFASCO94856 1347 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 LOXHD1Q8IVV2 1947 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 GTPBP6O43824 516 aaPredicted RBP15.47■□□□□ 0.07
SERF1B-204ENST00000506542 FXR1P51114 621 aaKnown RBP eCLIP15.47■□□□□ 0.07
SERF1B-204ENST00000506542 DEFB128Q7Z7B8 93 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 SESTD1Q86VW0 696 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 CCDC60Q8IWA6 550 aaPredicted RBP15.47■□□□□ 0.07
SERF1B-204ENST00000506542 TRIML1Q8N9V2 468 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 SLC5A5Q92911 643 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 PNMA5Q96PV4 448 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 PLIN2Q99541 437 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.47■□□□□ 0.07
SERF1B-204ENST00000506542 OSBPL7Q9BZF2 842 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 STK17AQ9UEE5 414 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 MAN1B1Q9UKM7 699 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 VAV3Q9UKW4 847 aa15.47■□□□□ 0.07
SERF1B-204ENST00000506542 KDM3AQ9Y4C1 1321 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 COL6A3P12111 3177 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 MYL1P05976 194 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 IGBP1P78318 339 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 TMEM119Q4V9L6 283 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 HYIQ5T013 277 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 LMBR1Q8WVP7 490 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 STAMQ92783 540 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 CDK5RAP3Q96JB5 506 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 GSDMAQ96QA5 445 aa15.46■□□□□ 0.07
SERF1B-204ENST00000506542 NAT10Q9H0A0 1025 aaKnown RBP15.46■□□□□ 0.07
SERF1B-204ENST00000506542 SIP14410 1827 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 C17orf102A2RUQ5 167 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 PTPN11Q06124 597 aaPredicted RBP15.45■□□□□ 0.06
SERF1B-204ENST00000506542 MORC3Q14149 939 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 HAUS3Q68CZ6 603 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 ABHD15Q6UXT9 468 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 RUFY4Q6ZNE9 571 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 LUZP1Q86V48 1076 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 ATP6V0A1Q93050 837 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 BPIFA3Q9BQP9 254 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 BLOC1S4Q9NUP1 217 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 STK24Q9Y6E0 443 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 EVPLQ92817 2033 aa15.45■□□□□ 0.06
SERF1B-204ENST00000506542 BACH1O14867 736 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 LGR5O75473 907 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 PSMD10O75832 226 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ATG7O95352 703 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 SUPT20HL2P0C7V6 817 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ATP4AP20648 1035 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 CASP1P29466 404 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 PPP2R5CQ13362 524 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 GPNMBQ14956 572 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 IQCB1Q15051 598 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 PLCB4Q15147 1175 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 UGCGQ16739 394 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 TCTN1Q2MV58 587 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 TRIM71Q2Q1W2 868 aaKnown RBP15.44■□□□□ 0.06
SERF1B-204ENST00000506542 LRCH2Q5VUJ6 765 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ISM2Q6H9L7 571 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 FAM109BQ6ICB4 259 aaPredicted RBP15.44■□□□□ 0.06
SERF1B-204ENST00000506542 SWSAP1Q6NVH7 229 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ZNF365Q70YC5 407 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ERMNQ8TAM6 284 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 NT5C3AQ9H0P0 336 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 UNC45AQ9H3U1 944 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ZNF215Q9UL58 517 aaPredicted RBP15.44■□□□□ 0.06
SERF1B-204ENST00000506542 EMSYQ7Z589 1322 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 CKBP12277 381 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 BMP6P22004 513 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 HOXC8P31273 242 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 CCT6AP40227 531 aaKnown RBP15.44■□□□□ 0.06
SERF1B-204ENST00000506542 STAT5BP51692 787 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 CUL4BQ13620 913 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 TMEM240Q5SV17 173 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 MARCH8Q5T0T0 291 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 NCAPH2Q6IBW4 605 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 OTOP2Q7RTS6 562 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 TMEM199Q8N511 208 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 BLZF1Q9H2G9 400 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 SMARCAD1Q9H4L7 1026 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 ERAP1Q9NZ08 941 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 CXXC1Q9P0U4 656 aaPredicted RBP15.44■□□□□ 0.06
SERF1B-204ENST00000506542 SAMM50Q9Y512 469 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 GBF1Q92538 1859 aa15.44■□□□□ 0.06
SERF1B-204ENST00000506542 GAS7O60861 476 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 CTSHP09668 335 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 IQCF3P0C7M6 154 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 INSRRP14616 1297 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 THPOP40225 353 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 ADAM17P78536 824 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 PPFIA1Q13136 1202 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 MBTPS1Q14703 1052 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 GRIK4Q16099 956 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 ECM1Q16610 540 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 TRAF7Q6Q0C0 670 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 SERINC5Q86VE9 423 aa15.43■□□□□ 0.06
SERF1B-204ENST00000506542 LARP4BQ92615 738 aaKnown RBP15.43■□□□□ 0.06
SERF1B-204ENST00000506542 ANP32BQ92688 251 aaKnown RBP15.43■□□□□ 0.06
SERF1B-204ENST00000506542 RAD54LQ92698 747 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms