RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TUFT1Q9NNX1 390 aa20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 A0A087WWV3 80 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 RPA1P27694 616 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 DEFB103AP81534 67 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 PDIA5Q14554 519 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 ECM1Q16610 540 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 KIZQ2M2Z5 673 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 XKR9Q5GH70 373 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 TSHZ1Q6ZSZ6 1077 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 ERMNQ8TAM6 284 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 PIGOQ8TEQ8 1089 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 SEPT8Q92599 483 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 MAP7D2Q96T17 732 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 ADAMTS10Q9H324 1103 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 DHX33Q9H6R0 707 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 BMP2KQ9NSY1 1161 aaPredicted RBP20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 LRWD1Q9UFC0 647 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 AKT3Q9Y243 479 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 GINS2Q9Y248 185 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 MYH15Q9Y2K3 1946 aa20.39■□□□□ 0.85
PDLIM7-216ENST00000506537 ABHD14A-ACY1A0A1B0GW23 586 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 DLL1O00548 723 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 ATP2A2P16615 1042 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 TMOD1P28289 359 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 CD52P31358 61 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 PBX2P40425 430 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 IKBKEQ14164 716 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 SF3A1Q15459 793 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 DTHD1Q6ZMT9 781 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 OTUD6AQ7L8S5 288 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 ZNF668Q96K58 619 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 OSMRQ99650 979 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 ANKEF1Q9NU02 776 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 PPME1Q9Y570 386 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 CLIC4Q9Y696 253 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 SQORQ9Y6N5 450 aa20.38■□□□□ 0.85
PDLIM7-216ENST00000506537 CDC25AP30304 524 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 RARRES1P49788 294 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 GPC3P51654 580 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 NLRP11P59045 1033 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 PKP1Q13835 747 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 EMC2Q15006 297 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 ARL6IP4Q66PJ3 421 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 HAUS3Q68CZ6 603 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 TMCO2Q7Z6W1 182 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 LINC01599Q8WXQ3 324 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 APBB2Q92870 758 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 SLC9A7Q96T83 725 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 MMTAG2Q9BU76 263 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 PBX4Q9BYU1 374 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 XPNPEP1Q9NQW7 623 aa20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 NOC2LQ9Y3T9 749 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-216ENST00000506537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 VWA3AA6NCI4 1184 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 CCT6AP40227 531 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 RFC5P40937 340 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 KCNJ6P48051 423 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 RABGGTBP53611 331 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 CRYBB1P53674 252 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 POLGP54098 1239 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 PTPAQ15257 358 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 USP38Q8NB14 1042 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 SLC17A8Q8NDX2 589 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 SNX29Q8TEQ0 813 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 SLC7A3Q8WY07 619 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 RAB34Q9BZG1 259 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 ZSCAN16Q9H4T2 348 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 PADI3Q9ULW8 664 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 CHD7Q9P2D1 2997 aa20.36■□□□□ 0.85
PDLIM7-216ENST00000506537 EFCAB14O75071 495 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 BMP15O95972 392 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 DNAJB2P25686 324 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 GRIN1Q05586 938 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 PAK2Q13177 524 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 FOXD4L5Q5VV16 416 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 GPR153Q6NV75 609 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 HERC6Q8IVU3 1022 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 PHOSPHO2Q8TCD6 241 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 FOXD4L4Q8WXT5 416 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 TMEM143Q96AN5 459 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 JPH2Q9BR39 696 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 TMX1Q9H3N1 280 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 ERVK-5Q9HDB9 667 aa20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 SUCLA2Q9P2R7 463 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 YBX2Q9Y2T7 364 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-216ENST00000506537 ZSCAN22P10073 491 aaPredicted RBP20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 XRCC6P12956 609 aaKnown RBP eCLIP20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 MYOGP15173 224 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 MUTP22033 750 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 Q7L0L9 218 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 FAM228AQ86W67 206 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 KSR1Q8IVT5 923 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 NACC1Q96RE7 527 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 USP28Q96RU2 1077 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 DBR1Q9UK59 544 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 CDH23Q9H251 3354 aa20.34■□□□□ 0.85
PDLIM7-216ENST00000506537 RPS6KA5O75582 802 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms