RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ADAM17P78536 824 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 EPHA7Q15375 998 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 RILPL1Q5EBL4 403 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 HABP4Q5JVS0 413 aaKnown RBP8.16□□□□□ -1.1
GYPB-206ENST00000506516 NCAPH2Q6IBW4 605 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 PSRC1Q6PGN9 363 aaPredicted RBP8.16□□□□□ -1.1
GYPB-206ENST00000506516 B3GNT9Q6UX72 402 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 LRRC8DQ7L1W4 858 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 NME8Q8N427 588 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 HAS1Q92839 578 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 SCLYQ96I15 445 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 MTMR9Q96QG7 549 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 CTAGE1Q96RT6 745 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 FTOQ9C0B1 505 aaKnown RBP eCLIP8.16□□□□□ -1.1
GYPB-206ENST00000506516 HCSTQ9UBK5 93 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 TUBE1Q9UJT0 475 aa8.16□□□□□ -1.1
GYPB-206ENST00000506516 MYH7BA7E2Y1 1941 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 COL1A2P08123 1366 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 MBLAC1A4D2B0 266 aaPredicted RBP8.15□□□□□ -1.1
GYPB-206ENST00000506516 VPS37CA5D8V6 355 aaPredicted RBP8.15□□□□□ -1.1
GYPB-206ENST00000506516 KIF28PB7ZC32 967 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 M0QZ92 97 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 LAD1O00515 517 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 MAGEB2O15479 319 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 ACRP10323 421 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 TMOD1P28289 359 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 TECP42680 631 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 RBL2Q08999 1139 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 SHHQ15465 462 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 TMEM266Q2M3C6 531 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 KMT5BQ4FZB7 885 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 XKR3Q5GH77 459 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 TMEM240Q5SV17 173 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 MARCH8Q5T0T0 291 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 ZNF618Q5T7W0 954 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 IER5Q5VY09 327 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 MTHFD1LQ6UB35 978 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 ZNF365Q70YC5 407 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 OTUD6AQ7L8S5 288 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 BRAPQ7Z569 592 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 DEFB128Q7Z7B8 93 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 RPAINQ86UA6 219 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 EXOC8Q8IYI6 725 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 NEK9Q8TD19 979 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 DNAJB3Q8WWF6 145 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 DHX38Q92620 1227 aaKnown RBP8.15□□□□□ -1.1
GYPB-206ENST00000506516 WNT2BQ93097 391 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 NIFKQ9BYG3 293 aaKnown RBP8.15□□□□□ -1.1
GYPB-206ENST00000506516 RAB34Q9BZG1 259 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 WNT8AQ9H1J5 351 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 ZSWIM4Q9H7M6 989 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 VAV3Q9UKW4 847 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 PCDHA2Q9Y5H9 948 aa8.15□□□□□ -1.1
GYPB-206ENST00000506516 IGSF9BQ9UPX0 1349 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 SCN10AQ9Y5Y9 1956 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 ALPK3Q96L96 1907 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 SMIM35A0A1B0GVV1 85 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 EML1O00423 815 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 SLITRK3O94933 977 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 OR52Z1P0C646 297 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 SYT1P21579 422 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 DNM2P50570 870 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 TOB1P50616 345 aaPredicted RBP8.14□□□□□ -1.11
GYPB-206ENST00000506516 EPHB4P54760 987 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 PRKCEQ02156 737 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 PDIA5Q14554 519 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 TRIM71Q2Q1W2 868 aaKnown RBP8.14□□□□□ -1.11
GYPB-206ENST00000506516 TUSC1Q2TAM9 212 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 LRIT3Q3SXY7 679 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 C9orf50Q5SZB4 431 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 DTHD1Q6ZMT9 781 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 C16orf59Q7L2K0 433 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 TPH2Q8IWU9 490 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 C4orf19Q8IY42 314 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 METTL13Q8N6R0 699 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 BANK1Q8NDB2 785 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 ERMNQ8TAM6 284 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 HERVK_113Q902F9 699 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 RNPC3Q96LT9 517 aaKnown RBP8.14□□□□□ -1.11
GYPB-206ENST00000506516 JPH2Q9BR39 696 aaPredicted RBP8.14□□□□□ -1.11
GYPB-206ENST00000506516 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
GYPB-206ENST00000506516 FAM49AQ9H0Q0 323 aaPredicted RBP8.14□□□□□ -1.11
GYPB-206ENST00000506516 TMEM60Q9H2L4 133 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 PCDHB6Q9Y5E3 794 aa8.14□□□□□ -1.11
GYPB-206ENST00000506516 WNT7AO00755 349 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 ZNF862O60290 1169 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 EFCAB14O75071 495 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 CXCL10P02778 98 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 CTSHP09668 335 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 XRCC6P12956 609 aaKnown RBP eCLIP8.13□□□□□ -1.11
GYPB-206ENST00000506516 CDC42EP1Q00587 391 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 TBC1D8BQ0IIM8 1120 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 IKBKEQ14164 716 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 BECN1Q14457 450 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 UGCGQ16739 394 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 FAM26DQ5JW98 314 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 EFCAB12Q6NXP0 572 aa8.13□□□□□ -1.11
GYPB-206ENST00000506516 CNKSR3Q6P9H4 555 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms