RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CLEC2LP0C7M8 214 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 RAC2P15153 192 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 FAHP16930 419 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 GDNFP39905 211 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 MTNR1BP49286 362 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC5A3P53794 718 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 ADKP55263 362 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 MRPS9P82933 396 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 SRSF2Q01130 221 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 PICALMQ13492 652 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 GRM3Q14832 879 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 PAN2Q504Q3 1202 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 TTC38Q5R3I4 469 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 CCDC62Q6P9F0 684 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC23A3Q6PIS1 610 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 PAQR3Q6TCH7 311 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 NLRX1Q86UT6 975 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 PJA1Q8NG27 643 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC35G2Q8TBE7 412 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 FERMT2Q96AC1 680 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 TTC17Q96AE7 1141 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 RUNDC1Q96C34 613 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 QRSL1Q9H0R6 528 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 SEMA4AQ9H3S1 761 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 POFUT1Q9H488 388 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 CHST12Q9NRB3 414 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 C1orf112Q9NSG2 853 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 USP25Q9UHP3 1055 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 GPR160Q9UJ42 338 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 DBR1Q9UK59 544 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 EDARQ9UNE0 448 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 SIT1Q9Y3P8 196 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 CCDC88BA6NC98 1476 aa4.11□□□□□ -1.75
TRAPPC11-205ENST00000506426 ST20-MTHFSA0A0A6YYL1 179 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 PRSS38A1L453 326 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZC3H12DA2A288 527 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 PRAMEF22A3QJZ6 481 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 F8W031 263 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 ELL2O00472 640 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 NDUFS2O75306 463 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 PRPF6O94906 941 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 APOL3O95236 402 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 IFIT2P09913 472 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 OSMP13725 252 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 PHKG2P15735 406 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 C5AR1P21730 350 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 FUT4P22083 530 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC9A5Q14940 896 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 VPS72Q15906 364 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 COBLL1Q53SF7 1204 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 PRAMEF18Q5VWM3 479 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 B3GNT9Q6UX72 402 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 ZNF574Q6ZN55 896 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 NFXL1Q6ZNB6 911 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 KCNK18Q7Z418 384 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 RTN4RL1Q86UN2 441 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 VSIG10LQ86VR7 867 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 CILP2Q8IUL8 1156 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 SIRT2Q8IXJ6 389 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 ARRDC4Q8NCT1 418 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 AUTS2Q8WXX7 1259 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 FOXRED1Q96CU9 486 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC39A13Q96H72 371 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 MYL10Q9BUA6 226 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 RNF38Q9H0F5 515 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 C19orf44Q9H6X5 657 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 PRDM7Q9NQW5 492 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 PPP2R3BQ9Y5P8 575 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 NUMBLQ9Y6R0 609 aa4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 EIF4G3O43432 1585 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-205ENST00000506426 ANO9A1A5B4 782 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 MAFGO15525 162 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 LDHAP00338 332 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 LPLP06858 475 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 POU2F2P09086 479 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 ERVFC1P60507 584 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 SLC6A3Q01959 620 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 KIF23Q02241 960 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 ALDH6A1Q02252 535 aaKnown RBP4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 ROM1Q03395 351 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 ADCY2Q08462 1091 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 DBPQ10586 325 aaPredicted RBP4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 SAFB2Q14151 953 aaKnown RBP eCLIP4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 NR1I3Q14994 352 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 SAFBQ15424 915 aaKnown RBP eCLIP4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 LONRF3Q496Y0 759 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 PITRM1Q5JRX3 1037 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 ATAT1Q5SQI0 421 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 PRAMEF9Q5VWM5 478 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 KIAA1841Q6NSI8 718 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 WFDC3Q8IUB2 231 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 PPM1NQ8N819 430 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 FLCNQ8NFG4 579 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 CALML6Q8TD86 181 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 RSAD2Q8WXG1 361 aa4.09□□□□□ -1.75
TRAPPC11-205ENST00000506426 MYLIPQ8WY64 445 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms