RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 C9IYK1 514 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 GPR182O15218 404 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 SLC37A4O43826 429 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 IBSPP21815 317 aaPredicted RBP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 DNAJB1P25685 340 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 SFNP31947 248 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 SARSP49591 514 aaKnown RBP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 NLRP11P59045 1033 aaKnown RBP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 PRKCEQ02156 737 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 DSC3Q14574 896 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 NONOQ15233 471 aaKnown RBP eCLIP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 PAN2Q504Q3 1202 aaKnown RBP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 FAM102BQ5T8I3 360 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 CMTR2Q8IYT2 770 aaKnown RBP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 ZNF668Q96K58 619 aaPredicted RBP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 FAM167AQ96KS9 214 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 ALG13Q9NP73 1137 aaKnown RBP16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 TCEAL9Q9UHQ7 104 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 CEP131Q9UPN4 1083 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 COL4A6Q14031 1691 aa16.24■□□□□ 0.19
CDC42SE2-209ENST00000506419 EML1O00423 815 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 LARGE1O95461 756 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 STAG3L1P0CL83 205 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 KCNA5P22460 613 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 JAK3P52333 1124 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 DRP2Q13474 957 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 COL19A1Q14993 1142 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 ME3Q16798 604 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 LETM2Q2VYF4 491 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 LEXMQ3ZCV2 418 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 MOXD1Q6UVY6 613 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 MIER3Q7Z3K6 550 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 KRT25Q7Z3Z0 450 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 SPPL3Q8TCT6 385 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 SH2D3AQ9BRG2 576 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 NIFKQ9BYG3 293 aaKnown RBP16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 CD320Q9NPF0 282 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 DDX25Q9UHL0 483 aaKnown RBP16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 PCDHB7Q9Y5E2 793 aa16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 COL4A4P53420 1690 aaPredicted RBP16.23■□□□□ 0.19
CDC42SE2-209ENST00000506419 CDKL5O76039 1030 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 TIGD5Q53EQ6 642 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 SLC24A5Q71RS6 500 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 RDM1Q8NG50 284 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 NEK9Q8TD19 979 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 C11orf84Q9BUA3 381 aaPredicted RBP16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 NSUN3Q9H649 340 aaKnown RBP16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 ORC3Q9UBD5 711 aaPredicted RBP16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 LRFN2Q9ULH4 789 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 AKT3Q9Y243 479 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 RWDD3Q9Y3V2 267 aa16.22■□□□□ 0.19
CDC42SE2-209ENST00000506419 STK36Q9NRP7 1315 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 DENND3A2RUS2 1198 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 H3BQ06 376 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 ITGB1P05556 798 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 TMOD1P28289 359 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 LTBRP36941 435 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 GPC3P51654 580 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 XKR3Q5GH77 459 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 PPP4R3AQ6IN85 833 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 KLHL23Q8NBE8 558 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 HAS1Q92839 578 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 KHSRPQ92945 711 aaKnown RBP eCLIP16.21■□□□□ 0.196e-7■■□□□ 11.6
CDC42SE2-209ENST00000506419 PABPC5Q96DU9 382 aaKnown RBP16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 PLVAPQ9BX97 442 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 LMAN2LQ9H0V9 348 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 KCNMB3Q9NPA1 279 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 C1orf112Q9NSG2 853 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 HCSTQ9UBK5 93 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 VAV3Q9UKW4 847 aa16.21■□□□□ 0.19
CDC42SE2-209ENST00000506419 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 CSDE1O75534 798 aaKnown RBP16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 FGFR4P22455 802 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 EIF4BP23588 611 aaKnown RBP16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 GTF2F1P35269 517 aaKnown RBP eCLIP16.2■□□□□ 0.186e-7■■■■■ 32.9
CDC42SE2-209ENST00000506419 HYAL1Q12794 435 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 CTC1Q2NKJ3 1217 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 MTERF2Q49AM1 385 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 ODR4Q5SWX8 454 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 PIK3AP1Q6ZUJ8 805 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 ANO5Q75V66 913 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 NEK8Q86SG6 692 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 TNFRSF25Q93038 417 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 P2RX5Q93086 422 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 RNF19AQ9NV58 838 aa16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 TYW1Q9NV66 732 aaKnown RBP16.2■□□□□ 0.18
CDC42SE2-209ENST00000506419 EVPLQ92817 2033 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 GRXCR2A6NFK2 248 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 TBKBP1A7MCY6 615 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 CSPG5O95196 566 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 MMP1P03956 469 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 FGFR1P11362 822 aa16.19■□□□□ 0.18
CDC42SE2-209ENST00000506419 DARSP14868 501 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms