RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 NFX1Q12986 1120 aaKnown RBP17.43■□□□□ 0.38
MED28-204ENST00000506409 ADGRE1Q14246 886 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 ANO5Q75V66 913 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 NOSTRINQ8IVI9 506 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 TMEM40Q8WWA1 233 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 OSMRQ99650 979 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 SH2D3AQ9BRG2 576 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 LXNQ9BS40 222 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
MED28-204ENST00000506409 NOC2LQ9Y3T9 749 aaKnown RBP17.43■□□□□ 0.38
MED28-204ENST00000506409 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 LOXHD1Q8IVV2 1947 aa17.43■□□□□ 0.38
MED28-204ENST00000506409 LINC01553A4QN01 128 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 NLRP11P59045 1033 aaKnown RBP17.42■□□□□ 0.38
MED28-204ENST00000506409 CYP4A11Q02928 519 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 ODR4Q5SWX8 454 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 PLA2G4FQ68DD2 849 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 SPRED2Q7Z698 418 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 ZNF710Q8N1W2 664 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 LINC01599Q8WXQ3 324 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 MTMR9Q96QG7 549 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 CEP89Q96ST8 783 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 RGL1Q9NZL6 768 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 WRAP73Q9P2S5 460 aaPredicted RBP17.42■□□□□ 0.38
MED28-204ENST00000506409 EYSQ5T1H1 3165 aa17.42■□□□□ 0.38
MED28-204ENST00000506409 EPOPA6NHQ4 379 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 GPR182O15218 404 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 ORC2Q13416 577 aaPredicted RBP17.41■□□□□ 0.38
MED28-204ENST00000506409 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
MED28-204ENST00000506409 C4orf19Q8IY42 314 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 SLC17A8Q8NDX2 589 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 SP7Q8TDD2 431 aaPredicted RBP17.41■□□□□ 0.38
MED28-204ENST00000506409 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 SCLT1Q96NL6 688 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 TGS1Q96RS0 853 aaKnown RBP17.41■□□□□ 0.38
MED28-204ENST00000506409 TSPYL2Q9H2G4 693 aaPredicted RBP17.41■□□□□ 0.38
MED28-204ENST00000506409 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 TMX1Q9H3N1 280 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 ERVK-5Q9HDB9 667 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 MTUS1Q9ULD2 1270 aa17.41■□□□□ 0.38
MED28-204ENST00000506409 NOL7Q9UMY1 257 aaKnown RBP17.41■□□□□ 0.38
MED28-204ENST00000506409 IGKV6-21A0A0C4DH24 114 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 RFXAPO00287 272 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 MAFO75444 373 aaPredicted RBP17.4■□□□□ 0.38
MED28-204ENST00000506409 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
MED28-204ENST00000506409 GJB2P29033 226 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 YWHABP31946 246 aaKnown RBP17.4■□□□□ 0.38
MED28-204ENST00000506409 TRAPPC10P48553 1259 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 DNM2P50570 870 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 GPC3P51654 580 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 NPEPPSP55786 919 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 DRP2Q13474 957 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 ZNF174Q15697 407 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 FAM43BQ6ZT52 329 aaPredicted RBP17.4■□□□□ 0.38
MED28-204ENST00000506409 RTN4RL1Q86UN2 441 aaPredicted RBP17.4■□□□□ 0.38
MED28-204ENST00000506409 FAM228AQ86W67 206 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 TPH2Q8IWU9 490 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 ZNF668Q96K58 619 aaPredicted RBP17.4■□□□□ 0.38
MED28-204ENST00000506409 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 EIF2AK1Q9BQI3 630 aaKnown RBP17.4■□□□□ 0.38
MED28-204ENST00000506409 JPH2Q9BR39 696 aaPredicted RBP17.4■□□□□ 0.38
MED28-204ENST00000506409 ADAMTS10Q9H324 1103 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 ST3GAL5Q9UNP4 418 aa17.4■□□□□ 0.38
MED28-204ENST00000506409 TTC3P53804 2025 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 POTEMA6NI47 508 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 OR52Z1P0C646 297 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 ERVK-21P61565 698 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 OTUD6AQ7L8S5 288 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 NEK9Q8TD19 979 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 NLRP7Q8WX94 980 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 SLC7A3Q8WY07 619 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 SMC3Q9UQE7 1217 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 PPME1Q9Y570 386 aa17.39■□□□□ 0.37
MED28-204ENST00000506409 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.37
MED28-204ENST00000506409 DENND3A2RUS2 1198 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 GTPBP6O43824 516 aaPredicted RBP17.38■□□□□ 0.37
MED28-204ENST00000506409 SLITRK3O94933 977 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 EIF4BP23588 611 aaKnown RBP17.38■□□□□ 0.37
MED28-204ENST00000506409 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
MED28-204ENST00000506409 CDC42EP1Q00587 391 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 MCTP1Q6DN14 999 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 NPAS4Q8IUM7 802 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 EXOC8Q8IYI6 725 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
MED28-204ENST00000506409 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 ADAM2Q99965 735 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 HSD17B14Q9BPX1 270 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 C17orf80Q9BSJ5 609 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 SUCLA2Q9P2R7 463 aaPredicted RBP17.38■□□□□ 0.37
MED28-204ENST00000506409 COL4A6Q14031 1691 aa17.38■□□□□ 0.37
MED28-204ENST00000506409 H3BQV1 296 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 MGEA5O60502 916 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 STAG3L1P0CL83 205 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 DARSP14868 501 aaKnown RBP17.37■□□□□ 0.37
MED28-204ENST00000506409 IBSPP21815 317 aaPredicted RBP17.37■□□□□ 0.37
MED28-204ENST00000506409 RFC5P40937 340 aa17.37■□□□□ 0.37
MED28-204ENST00000506409 TECP42680 631 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms