RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CLCN4P51793 760 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 STAT2P52630 851 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 RPS6P62753 249 aaKnown RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 FAM193AP78312 1265 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 FGD1P98174 961 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 ADCY1Q08828 1119 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 WDR44Q5JSH3 913 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 MYSM1Q5VVJ2 828 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 KCNT2Q6UVM3 1135 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 PARM1Q6UWI2 310 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 TMC7Q7Z402 723 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 TMEM173Q86WV6 379 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 SLC39A11Q8N1S5 342 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 LCORLQ8N3X6 602 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 CHCHD4Q8N4Q1 142 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 DEFB124Q8NES8 71 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 DNERQ8NFT8 737 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 CMASQ8NFW8 434 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 CCER1Q8TC90 406 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 STAG1Q8WVM7 1258 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 LMBR1Q8WVP7 490 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 ZNF707Q96C28 371 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 LOXL4Q96JB6 756 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 VN1R3Q9BXE9 311 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 CCDC8Q9H0W5 538 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 PRORYQ9H606 182 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 CCDC86Q9H6F5 360 aaKnown RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 SETD4Q9NVD3 440 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 COL20A1Q9P218 1284 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 DKK4Q9UBT3 224 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 SYNPO2Q9UMS6 1093 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 CTDP1Q9Y5B0 961 aaPredicted RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 F8P00451 2351 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 SPENQ96T58 3664 aaKnown RBP4□□□□□ -1.77
TCOF1-208ENST00000506063 PCDH15Q96QU1 1955 aa4□□□□□ -1.77
TCOF1-208ENST00000506063 NAV3Q8IVL0 2385 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 MYO16Q9Y6X6 1858 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CSMD1Q96PZ7 3565 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 MAGEB6P1A0A0J9YX57 407 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SPAARA0A1B0GVQ0 90 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 PTPDC1A2A3K4 754 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 C9IYK1 514 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 H3BRB1 525 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SEC24BO95487 1268 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 LGALS2P05162 132 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 STAG3L1P0CL83 205 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 FGFR1P11362 822 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CALML3P27482 149 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SARSP49591 514 aaKnown RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SP2Q02086 613 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CFHR1Q03591 330 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 LAMC2Q13753 1193 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SLFN13Q68D06 897 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CCNI2Q6ZMN8 369 aaPredicted RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SEPT14Q6ZU15 432 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 TPRG1Q6ZUI0 275 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 PIP4P1Q86T03 277 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CABP7Q86V35 215 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 KBTBD6Q86V97 674 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 LONP2Q86WA8 852 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 FAM181AQ8N9Y4 354 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 BCL7CQ8WUZ0 217 aaPredicted RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 GLG1Q92896 1179 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CEP95Q96GE4 821 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 GMCL1Q96IK5 515 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CASD1Q96PB1 797 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 NELL2Q99435 816 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 MKNK1Q9BUB5 465 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 USP26Q9BXU7 913 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SLC4A5Q9BY07 1137 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CRNKL1Q9BZJ0 848 aaKnown RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 SEMA4CQ9C0C4 833 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 RANBP17Q9H2T7 1088 aaKnown RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 TUT1Q9H6E5 874 aaKnown RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 TLR7Q9NYK1 1049 aaKnown RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CLIP2Q9UDT6 1046 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 PUF60Q9UHX1 559 aaKnown RBP3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CCPG1Q9ULG6 757 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 PADI3Q9ULW8 664 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 TELO2Q9Y4R8 837 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 PCDHGA5Q9Y5G8 931 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 CDY2AQ9Y6F7 541 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 KIAA1549LQ6ZVL6 1849 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 PLIN4Q96Q06 1357 aa3.99□□□□□ -1.77
TCOF1-208ENST00000506063 IGSF9BQ9UPX0 1349 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 CEP192Q8TEP8 1941 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 MBLAC1A4D2B0 266 aaPredicted RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 ENO4A6NNW6 628 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 RFPL2O75678 378 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 CXCL14O95715 111 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 CTSAP10619 480 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 PDE6AP16499 860 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 HOXA6P31267 233 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 PPM1AP35813 382 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 CCR3P51677 355 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 FAM189BP81408 668 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 MTX1Q13505 466 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 WDR43Q15061 677 aaKnown RBP eCLIP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms