RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	PCDHB7	Q9Y5E2	793 aa		11.74	□□□□□ -0.53
NR1I3-222	ENST00000506018	C5orf67	F2Z3F1	127 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	NCK2	O43639	380 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	DGKI	O75912	1065 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	ATP4A	P20648	1035 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	BMPR1A	P36894	532 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	SARS	P49591	514 aa	Known RBP	11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	AK2	P54819	239 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	TFF2	Q03403	129 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	TBC1D8B	Q0IIM8	1120 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	INF2	Q27J81	1249 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	LETM2	Q2VYF4	491 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	NAALADL2	Q58DX5	795 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	EFCAB12	Q6NXP0	572 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	NEK8	Q86SG6	692 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	BANK1	Q8NDB2	785 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	PPP2R3C	Q969Q6	453 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	ZNF689	Q96CS4	500 aa	Predicted RBP	11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	PHF20	Q9BVI0	1012 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	UNC45A	Q9H3U1	944 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	TPCN1	Q9ULQ1	816 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	KIAA1671	Q9BY89	1806 aa		11.73	□□□□□ -0.53
NR1I3-222	ENST00000506018	ZBTB42	B2RXF5	422 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018		M0R2N6	131 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	PSMD10	O75832	226 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	TDP2	O95551	362 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	VTN	P04004	478 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	BMP1	P13497	986 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	ZSCAN20	P17040	1043 aa	Predicted RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	DNM2	P50570	870 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	TRIM29	Q14134	588 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	KIZ	Q2M2Z5	673 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	TMEM266	Q2M3C6	531 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	XKR3	Q5GH77	459 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	SLC24A5	Q71RS6	500 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	EXOC8	Q8IYI6	725 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	CLP1	Q92989	425 aa	Known RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	FAM20A	Q96MK3	541 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	AIFM3	Q96NN9	605 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	OSMR	Q99650	979 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	JPH2	Q9BR39	696 aa	Predicted RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	NSUN3	Q9H649	340 aa	Known RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	UBE2Z	Q9H832	354 aa	Predicted RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	ERVK-5	Q9HDB9	667 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	AAAS	Q9NRG9	546 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	ORC3	Q9UBD5	711 aa	Predicted RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	ST3GAL5	Q9UNP4	418 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	KCNJ14	Q9UNX9	436 aa		11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	NOC2L	Q9Y3T9	749 aa	Known RBP	11.72	□□□□□ -0.53
NR1I3-222	ENST00000506018	HOXA2	O43364	376 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	CCNT1	O60563	726 aa	Known RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	BAG4	O95429	457 aa	Known RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	IBSP	P21815	317 aa	Predicted RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	KRT2	P35908	639 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	KCNQ1	P51787	676 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	CLCN3	P51790	818 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	NLRP11	P59045	1033 aa	Known RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	PUS10	Q3MIT2	529 aa	Known RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	SPOUT1	Q5T280	376 aa	Known RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	PPP4R3A	Q6IN85	833 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	LINC01599	Q8WXQ3	324 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	P2RX5	Q93086	422 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	MBOAT7	Q96N66	472 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	PPP1R16B	Q96T49	567 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	ADAM2	Q99965	735 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	RC3H2	Q9HBD1	1191 aa	Known RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	RGS18	Q9NS28	235 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	FAM50B	Q9Y247	325 aa		11.71	□□□□□ -0.53
NR1I3-222	ENST00000506018	C19orf67	A6NJJ6	358 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	TBX3	O15119	743 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	ZNF862	O60290	1169 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	GPR32	O75388	356 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	EIF4B	P23588	611 aa	Known RBP	11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	NEK4	P51957	841 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	PSMC5	P62195	406 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	CSPP1	Q1MSJ5	1256 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	MTERF2	Q49AM1	385 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	PAN2	Q504Q3	1202 aa	Known RBP	11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	EP400NL	Q6ZTU2	488 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	PIK3AP1	Q6ZUJ8	805 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	SLFN12	Q8IYM2	578 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	LRRC71	Q8N4P6	559 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	ETNPPL	Q8TBG4	499 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	NLRP7	Q8WX94	980 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	GTF3C6	Q969F1	213 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	NIFK	Q9BYG3	293 aa	Known RBP	11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	INO80B	Q9C086	356 aa	Predicted RBP	11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	TMX1	Q9H3N1	280 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	ATP6V0A4	Q9HBG4	840 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	RTN4	Q9NQC3	1192 aa	Known RBP	11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	PCDHB12	Q9Y5F1	795 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	REV3L	O60673	3130 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	MYO7A	Q13402	2215 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	ATG2A	Q2TAZ0	1938 aa		11.7	□□□□□ -0.54
NR1I3-222	ENST00000506018	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.69	□□□□□ -0.54
NR1I3-222	ENST00000506018	DDX11L8	A8MPP1	907 aa		11.69	□□□□□ -0.54

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