RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 NEK1Q96PY6 1258 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 IWS1Q96ST2 819 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 RNPEPQ9H4A4 650 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 TLE6Q9H808 572 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 PNMA2Q9UL42 364 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 C2orf16Q68DN1 1984 aa8.19□□□□□ -1.1
VCAN-206ENST00000505615 BAZ2BQ9UIF8 2168 aaKnown RBP8.18□□□□□ -1.1
VCAN-206ENST00000505615 TSPY2A6NKD2 308 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 ENPP3O14638 875 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 FSCN2O14926 492 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 FOXP2O15409 715 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 SORBS3O60504 671 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 LILRB3O75022 631 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 LMNAP02545 664 aaKnown RBP8.18□□□□□ -1.1
VCAN-206ENST00000505615 LGALS2P05162 132 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 ASGR2P07307 311 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 PDHBP11177 359 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 NPR3P17342 541 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 GNAT2P19087 354 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 AOC1P19801 751 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 LPIN1Q14693 890 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 STXBP2Q15833 593 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 USH1GQ495M9 461 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 CELF3Q5SZQ8 465 aaKnown RBP8.18□□□□□ -1.1
VCAN-206ENST00000505615 ZNF385CQ66K41 422 aaPredicted RBP8.18□□□□□ -1.1
VCAN-206ENST00000505615 TMEM184AQ6ZMB5 413 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 Q6ZVU0 165 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 KBTBD3Q8NAB2 608 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 SPATA33Q96N06 139 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 RMDN3Q96TC7 470 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 CDCA3Q99618 268 aaPredicted RBP8.18□□□□□ -1.1
VCAN-206ENST00000505615 APOL5Q9BWW9 433 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 POMKQ9H5K3 350 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 MRVI1Q9Y6F6 885 aa8.18□□□□□ -1.1
VCAN-206ENST00000505615 FRYQ5TBA9 3013 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 IGF2RP11717 2491 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 PATL2C9JE40 543 aaKnown RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 TRIM66O15016 1216 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 RNF113AO15541 343 aaKnown RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 SPINT1O43278 529 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 EIF3JO75822 258 aaKnown RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 GGPS1O95749 300 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 SNHG28P0DPA3 235 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 EIF2AK2P19525 551 aaKnown RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 UBA1P22314 1058 aaKnown RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 TECP42680 631 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 GATMP50440 423 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 SP2Q02086 613 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 ZNF543Q08ER8 600 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 ST3GAL2Q16842 350 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 PAN2Q504Q3 1202 aaKnown RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 RNFT1Q5M7Z0 435 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 RTN4RL1Q86UN2 441 aaPredicted RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 SIRT2Q8IXJ6 389 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 DTWD2Q8NBA8 298 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 LMBR1Q8WVP7 490 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 GPKOWQ92917 476 aaPredicted RBP eCLIP8.17□□□□□ -1.1
VCAN-206ENST00000505615 TMEM47Q9BQJ4 181 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 MAF1Q9H063 256 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 BCL11AQ9H165 835 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 SEMA4AQ9H3S1 761 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 BCAS3Q9H6U6 928 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 NR2E1Q9Y466 385 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
VCAN-206ENST00000505615 R4GN57 208 aa8.17□□□□□ -1.1
VCAN-206ENST00000505615 FSD2A1L4K1 749 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 H3BRB1 525 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 OPLAHO14841 1288 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 ZZEF1O43149 2961 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 APPP05067 770 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 SLC3A2P08195 630 aaKnown RBP8.16□□□□□ -1.1
VCAN-206ENST00000505615 TOP1P11387 765 aaKnown RBP8.16□□□□□ -1.1
VCAN-206ENST00000505615 ERVFC1P60507 584 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 UBE3AQ05086 875 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 CTDSPL2Q05D32 466 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 RSPO4Q2I0M5 234 aaPredicted RBP8.16□□□□□ -1.1
VCAN-206ENST00000505615 MIA3Q5JRA6 1907 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 FBXO47Q5MNV8 452 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 RUFY4Q6ZNE9 571 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 SETXQ7Z333 2677 aaKnown RBP8.16□□□□□ -1.1
VCAN-206ENST00000505615 TRIM50Q86XT4 487 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 NPAS4Q8IUM7 802 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 FTSJ3Q8IY81 847 aaKnown RBP8.16□□□□□ -1.1
VCAN-206ENST00000505615 DCLK2Q8N568 766 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 FLCNQ8NFG4 579 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 IL31RAQ8NI17 732 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 CYP2W1Q8TAV3 490 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 KCNG4Q8TDN1 519 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 NAPBQ9H115 298 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 CPVLQ9H3G5 476 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 MFSD1Q9H3U5 465 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 TUT1Q9H6E5 874 aaKnown RBP8.16□□□□□ -1.1
VCAN-206ENST00000505615 PXMP2Q9NR77 195 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 SETD4Q9NVD3 440 aa8.16□□□□□ -1.1
VCAN-206ENST00000505615 RALYQ9UKM9 306 aaKnown RBP8.16□□□□□ -1.1
VCAN-206ENST00000505615 EVPLQ92817 2033 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 ABCB11O95342 1321 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 CCDC171Q6TFL3 1326 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 SLC35F4A4IF30 521 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms