RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 LINC01465Q8N7H1 131 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 CCDC148Q8NFR7 591 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 POF1BQ8WVV4 589 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 TCEAL9Q9UHQ7 104 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 SAMM50Q9Y512 469 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 PCDHGC5Q9Y5F6 944 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
SNHG4-202ENST00000505522 PLXNA4Q9HCM2 1894 aa13.82□□□□□ -0.2
SNHG4-202ENST00000505522 MYH9P35579 1960 aaKnown RBP13.82□□□□□ -0.2
SNHG4-202ENST00000505522 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 WDR64B1ANS9 1081 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 REC8O95072 547 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 FAM189BP81408 668 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 DSC3Q14574 896 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 SMAD2Q15796 467 aaKnown RBP13.81□□□□□ -0.2
SNHG4-202ENST00000505522 ODR4Q5SWX8 454 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 ADHFE1Q8IWW8 467 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 GJA10Q969M2 543 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 FAM122AQ96E09 287 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 MSLNLQ96KJ4 702 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 SH3GLB2Q9NR46 395 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 DISC1Q9NRI5 854 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 CEP131Q9UPN4 1083 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 HCN4Q9Y3Q4 1203 aa13.81□□□□□ -0.2
SNHG4-202ENST00000505522 WDR81Q562E7 1941 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 MAGEB2O15479 319 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 CHMP2AO43633 222 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 OATP04181 439 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 FGFR1P11362 822 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 USP11P51784 963 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 NLRP11P59045 1033 aaKnown RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 NLRP5P59047 1200 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 PRKCEQ02156 737 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 SMAD4Q13485 552 aaKnown RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 UGCGQ16739 394 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 SPOUT1Q5T280 376 aaKnown RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 EFCAB12Q6NXP0 572 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 FAM43BQ6ZT52 329 aaPredicted RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 RBM23Q86U06 439 aaKnown RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 SLC5A5Q92911 643 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 ZNF668Q96K58 619 aaPredicted RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 FAM167AQ96KS9 214 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 ADAMTS10Q9H324 1103 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 UNC45AQ9H3U1 944 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 TYW1Q9NV66 732 aaKnown RBP13.8□□□□□ -0.2
SNHG4-202ENST00000505522 CLEC1BQ9P126 229 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 CD207Q9UJ71 328 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 AKT3Q9Y243 479 aa13.8□□□□□ -0.2
SNHG4-202ENST00000505522 PRR33A8MZF0 331 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 DCXO43602 365 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 GAS7O60861 476 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 FGF18O76093 207 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 ALADP13716 330 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 NRIP1P48552 1158 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 NDUFV1P49821 464 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 SSRP1Q08945 709 aaKnown RBP13.79□□□□□ -0.2
SNHG4-202ENST00000505522 LRCH2Q5VUJ6 765 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 EFHBQ8N7U6 833 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 PPP2R3CQ969Q6 453 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 RIT2Q99578 217 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 CWH43Q9H720 699 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
SNHG4-202ENST00000505522 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 NRBP2Q9NSY0 501 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
SNHG4-202ENST00000505522 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 PCDHB12Q9Y5F1 795 aa13.79□□□□□ -0.2
SNHG4-202ENST00000505522 PSMD10O75832 226 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 TDP2O95551 362 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 EYA4O95677 639 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 GLP2RO95838 553 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 TMOD1P28289 359 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 SFNP31947 248 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 ERVFC1P60507 584 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 Q4G0T1 1027 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 TEKT3Q9BXF9 490 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 BARX2Q9UMQ3 279 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-202ENST00000505522 ARIH1Q9Y4X5 557 aaPredicted RBP13.78□□□□□ -0.2
SNHG4-202ENST00000505522 CYP46A1Q9Y6A2 500 aa13.78□□□□□ -0.2
SNHG4-202ENST00000505522 CYP3A7-CYP3A51PA0A087WV96 503 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 TMEM150BA6NC51 233 aa13.77□□□□□ -0.21
SNHG4-202ENST00000505522 M0R2N6 131 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms