RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 ATXN2LQ8WWM7 1075 aaKnown RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 COPS5Q92905 334 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 SPATA33Q96N06 139 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 BPIFA3Q9BQP9 254 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 REEP2Q9BRK0 252 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 ABHD16BQ9H3Z7 469 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 ZHX3Q9H4I2 956 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 ZNF302Q9NR11 478 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 PANK4Q9NVE7 773 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 FLRT1Q9NZU1 646 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 DBR1Q9UK59 544 aaKnown RBP10.38□□□□□ -0.75
TPM3-218ENST00000505010 CTNND2Q9UQB3 1225 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 GDAQ9Y2T3 454 aa10.38□□□□□ -0.75
TPM3-218ENST00000505010 PVALEFA0A1B0GWK0 134 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 GSTTP1A0A1W2PQM5 241 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 RBM47A0AV96 593 aaKnown RBP10.37□□□□□ -0.75
TPM3-218ENST00000505010 TMEM150BA6NC51 233 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 RHOBTB3O94955 611 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 GH1P01241 217 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 TCF7P36402 384 aaPredicted RBP10.37□□□□□ -0.75
TPM3-218ENST00000505010 ARHGAP1Q07960 439 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 ACVR2BQ13705 512 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 GRIN2CQ14957 1233 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 ARSHQ5FYA8 562 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 XKR9Q5GH70 373 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 TMEM63BQ5T3F8 832 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 GJC2Q5T442 439 aaPredicted RBP10.37□□□□□ -0.75
TPM3-218ENST00000505010 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
TPM3-218ENST00000505010 OLFML2BQ68BL8 750 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 RINT1Q6NUQ1 792 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 PADI6Q6TGC4 694 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 DHX40Q8IX18 779 aaKnown RBP10.37□□□□□ -0.75
TPM3-218ENST00000505010 HPS3Q969F9 1004 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 DNAJC19Q96DA6 116 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 GPR20Q99678 358 aa10.37□□□□□ -0.75
TPM3-218ENST00000505010 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.36□□□□□ -0.75
TPM3-218ENST00000505010 PPP1R3GB7ZBB8 358 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 KBTBD13C9JR72 458 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 ZNF862O60290 1169 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 USO1O60763 962 aaKnown RBP10.36□□□□□ -0.75
TPM3-218ENST00000505010 FAM13AO94988 1023 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 ATG7O95352 703 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 OATP04181 439 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.759e-13■□□□□ 8.6
TPM3-218ENST00000505010 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
TPM3-218ENST00000505010 PTGS1P23219 599 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
TPM3-218ENST00000505010 CYP2C19P33261 490 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 DEKP35659 375 aaKnown RBP10.36□□□□□ -0.75
TPM3-218ENST00000505010 RARRES1P49788 294 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 TPM4P67936 248 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 MYL5Q02045 173 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 STIM1Q13586 685 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 GIT2Q14161 759 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 IQCB1Q15051 598 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 UVSSAQ2YD98 709 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 CCDC144BQ3MJ40 725 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 PRAMEF19Q5SWL8 479 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 OTUD6AQ7L8S5 288 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 OR6J1Q8NGC5 347 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 PPM1EQ8WY54 764 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 SEPT1Q8WYJ6 367 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 RNPC3Q96LT9 517 aaKnown RBP10.36□□□□□ -0.75
TPM3-218ENST00000505010 ASB2Q96Q27 587 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 SH2D3AQ9BRG2 576 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 GTPBP4Q9BZE4 634 aaKnown RBP10.36□□□□□ -0.75
TPM3-218ENST00000505010 AZI2Q9H6S1 392 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 SLC39A2Q9NP94 309 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 ANKEF1Q9NU02 776 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 KCND2Q9NZV8 630 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 TBC1D7Q9P0N9 293 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 MAPK8IP1Q9UQF2 711 aa10.36□□□□□ -0.75
TPM3-218ENST00000505010 IGKV6D-21A0A0A0MT36 114 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.35□□□□□ -0.75
TPM3-218ENST00000505010 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.35□□□□□ -0.75
TPM3-218ENST00000505010 FRMD3A2A2Y4 597 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 TRIM43BA6NCK2 446 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 SMTNL1A8MU46 457 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 PSMA7O14818 248 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
TPM3-218ENST00000505010 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 SMPD1P17405 629 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 GAP43P17677 238 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 PRCPP42785 496 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 STX17P56962 302 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 TNFAIP2Q03169 654 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 STK4Q13043 487 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 PAK1Q13153 545 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 PSMD2Q13200 908 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 HSDL1Q3SXM5 330 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 TRIM60Q495X7 471 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 MTERF2Q49AM1 385 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 DUSP28Q4G0W2 176 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 XKR3Q5GH77 459 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 HERC4Q5GLZ8 1057 aaPredicted RBP10.35□□□□□ -0.75
TPM3-218ENST00000505010 FAM26FQ5R3K3 315 aa10.35□□□□□ -0.75
TPM3-218ENST00000505010 C1orf186Q6ZWK4 172 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms