RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 ODR4Q5SWX8 454 aa23.11■■□□□ 1.29
DDR1-255ENST00000504927 ARL6IP4Q66PJ3 421 aaKnown RBP23.11■■□□□ 1.29
DDR1-255ENST00000504927 HAUS3Q68CZ6 603 aa23.11■■□□□ 1.29
DDR1-255ENST00000504927 CATSPER3Q86XQ3 398 aa23.11■■□□□ 1.29
DDR1-255ENST00000504927 SLC7A3Q8WY07 619 aa23.11■■□□□ 1.29
DDR1-255ENST00000504927 ZSCAN16Q9H4T2 348 aaPredicted RBP23.11■■□□□ 1.29
DDR1-255ENST00000504927 AKT3Q9Y243 479 aa23.11■■□□□ 1.29
DDR1-255ENST00000504927 TET1Q8NFU7 2136 aa23.11■■□□□ 1.29
DDR1-255ENST00000504927 CHD9Q3L8U1 2897 aa23.11■■□□□ 1.29
DDR1-255ENST00000504927 TMEM150BA6NC51 233 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 SPATA31C1P0DKV0 1188 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 CLCN3P51790 818 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 NPEPPSP55786 919 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 WDR5P61964 334 aaKnown RBP23.1■■□□□ 1.29
DDR1-255ENST00000504927 XKR9Q5GH70 373 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 FERMT3Q86UX7 667 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 LRRC71Q8N4P6 559 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 IGSF22Q8N9C0 903 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 MSRAQ9UJ68 235 aa23.1■■□□□ 1.29
DDR1-255ENST00000504927 COL6A3P12111 3177 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 GAS2O43903 313 aaKnown RBP23.09■■□□□ 1.29
DDR1-255ENST00000504927 GPR32O75388 356 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 RAB30Q15771 203 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 TCTN1Q2MV58 587 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 PLA2G4FQ68DD2 849 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 NACC1Q96RE7 527 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 SH2D3AQ9BRG2 576 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 FTHL17Q9BXU8 183 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 OSBPL7Q9BZF2 842 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 DHX33Q9H6R0 707 aaKnown RBP23.09■■□□□ 1.29
DDR1-255ENST00000504927 MTMR6Q9Y217 621 aa23.09■■□□□ 1.29
DDR1-255ENST00000504927 VTNP04004 478 aa23.08■■□□□ 1.29
DDR1-255ENST00000504927 POLGP54098 1239 aaPredicted RBP23.08■■□□□ 1.29
DDR1-255ENST00000504927 NLRP11P59045 1033 aaKnown RBP23.08■■□□□ 1.29
DDR1-255ENST00000504927 KIZQ2M2Z5 673 aa23.08■■□□□ 1.29
DDR1-255ENST00000504927 GINS2Q9Y248 185 aa23.08■■□□□ 1.29
DDR1-255ENST00000504927 PCDHA11Q9Y5I1 949 aa23.08■■□□□ 1.29
DDR1-255ENST00000504927 WDR81Q562E7 1941 aa23.08■■□□□ 1.28
DDR1-255ENST00000504927 TMEM265A0A087WTH1 108 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 GRXCR1A8MXD5 290 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 ZBTB39O15060 712 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 GPR182O15218 404 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 MED24O75448 989 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 AMHP03971 560 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 PAK2Q13177 524 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 MKRN4PQ13434 485 aaPredicted RBP23.07■■□□□ 1.28
DDR1-255ENST00000504927 ZNF579Q8NAF0 562 aaKnown RBP23.07■■□□□ 1.28
DDR1-255ENST00000504927 TCP11Q8WWU5 503 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 CCDC43Q96MW1 224 aaKnown RBP23.07■■□□□ 1.28
DDR1-255ENST00000504927 PBX4Q9BYU1 374 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 ADAMTS10Q9H324 1103 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 AGO3Q9H9G7 860 aaKnown RBP23.07■■□□□ 1.28
DDR1-255ENST00000504927 CDHR5Q9HBB8 845 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 SUCLA2Q9P2R7 463 aaPredicted RBP23.07■■□□□ 1.28
DDR1-255ENST00000504927 DBR1Q9UK59 544 aaKnown RBP23.07■■□□□ 1.28
DDR1-255ENST00000504927 PADI3Q9ULW8 664 aa23.07■■□□□ 1.28
DDR1-255ENST00000504927 RPS6KA5O75582 802 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 DGAT1O75907 488 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 DNAJB2P25686 324 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 CD52P31358 61 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 CCT6AP40227 531 aaKnown RBP23.06■■□□□ 1.28
DDR1-255ENST00000504927 RESTQ13127 1097 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 IL17AQ16552 155 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 KRT79Q5XKE5 535 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 HERC6Q8IVU3 1022 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 PIGOQ8TEQ8 1089 aa23.06■■□□□ 1.28
DDR1-255ENST00000504927 ASAP2O43150 1006 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 EIF4BP23588 611 aaKnown RBP23.05■■□□□ 1.28
DDR1-255ENST00000504927 RARRES1P49788 294 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 GPC3P51654 580 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 SF3A1Q15459 793 aaKnown RBP23.05■■□□□ 1.28
DDR1-255ENST00000504927 ZNF697Q5TEC3 545 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 ZNF410Q86VK4 478 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 DEFB123Q8N688 67 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 TIFAQ96CG3 184 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 OSMRQ99650 979 aa23.05■■□□□ 1.28
DDR1-255ENST00000504927 ENPP3O14638 875 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 DEFB103AP81534 67 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 DRP2Q13474 957 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 EMC2Q15006 297 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.04■■□□□ 1.28
DDR1-255ENST00000504927 KCTD17Q8N5Z5 321 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 NLRP7Q8WX94 980 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 AK8Q96MA6 479 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 MTRQ99707 1265 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 ZBED2Q9BTP6 218 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 INO80BQ9C086 356 aaPredicted RBP23.04■■□□□ 1.28
DDR1-255ENST00000504927 ST3GAL5Q9UNP4 418 aa23.04■■□□□ 1.28
DDR1-255ENST00000504927 NOC2LQ9Y3T9 749 aaKnown RBP23.04■■□□□ 1.28
DDR1-255ENST00000504927 GBF1Q92538 1859 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 CHD7Q9P2D1 2997 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.03■■□□□ 1.28
DDR1-255ENST00000504927 VWA3AA6NCI4 1184 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 PBX2P40425 430 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 NFX1Q12986 1120 aaKnown RBP23.03■■□□□ 1.28
DDR1-255ENST00000504927 BECN1Q14457 450 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 RHPN2Q8IUC4 686 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 SNX29Q8TEQ0 813 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 TMEM40Q8WWA1 233 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 PSPC1Q8WXF1 523 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms