RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 TMCO3Q6UWJ1 677 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 CATSPERGQ6ZRH7 1159 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 DAW1Q8N136 415 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 NLGN2Q8NFZ4 835 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 RDM1Q8NG50 284 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 HOXC10Q9NYD6 342 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 GGA3Q9NZ52 723 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 FBXL5Q9UKA1 691 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 FRMD4BQ9Y2L6 1034 aa16.91■□□□□ 0.3
SNCAIP-207ENST00000504884 TESPA1A2RU30 521 aaPredicted RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 WDR64B1ANS9 1081 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ENC1O14682 589 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ATP9AO75110 1047 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 PPP1R37O75864 691 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ATP1A1P05023 1023 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 NR3C2P08235 984 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 YWHABP31946 246 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 PSMC5P62195 406 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 GFPT1Q06210 699 aaPredicted RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 RAPGEF1Q13905 1077 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ASIC2Q16515 512 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 SLC9A9Q8IVB4 645 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 GPRASP2Q96D09 838 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 PARD6BQ9BYG5 372 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 TMEM206Q9H813 350 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 AGPAT3Q9NRZ7 376 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 JRKLQ9Y4A0 524 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 BZW2Q9Y6E2 419 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 UCHL3P15374 230 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 LMNB1P20700 586 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 KLHL30Q0D2K2 578 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 SYCP3Q8IZU3 236 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 RNF10Q8N5U6 811 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 NSUN6Q8TEA1 469 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 CCDC43Q96MW1 224 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 EPC1Q9H2F5 836 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ANKEF1Q9NU02 776 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ZNF446Q9NWS9 450 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 FZD1Q9UP38 647 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 AFG3L2Q9Y4W6 797 aa16.9■□□□□ 0.3
SNCAIP-207ENST00000504884 ACTN1P12814 892 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 PLS3P13797 630 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 HIRAP54198 1017 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 APBA1Q02410 837 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 TMEM132BQ14DG7 1078 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 SLC18A3Q16572 532 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 ZNF746Q6NUN9 644 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 KSR1Q8IVT5 923 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 SPAG5Q96R06 1193 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 SENP7Q9BQF6 1050 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 TEX13BQ9BXU2 312 aa16.89■□□□□ 0.29
SNCAIP-207ENST00000504884 ATP8B1O43520 1251 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 CBX1P83916 185 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 PPP2R5AQ15172 486 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 MAEAQ7L5Y9 396 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 TMEM174Q8WUU8 243 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 ALS2CR12Q96Q35 445 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 HDAC6Q9UBN7 1215 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 MYPNQ86TC9 1320 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 K7ENM7 598 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 TUBBP07437 444 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 PRLRP16471 622 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 CKAP4Q07065 602 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 GLIPR1L2Q4G1C9 344 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 C10orf76Q5T2E6 689 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 IRF2BP2Q7Z5L9 587 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 SLC17A8Q8NDX2 589 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 RPGRIP1Q96KN7 1286 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 DRC1Q96MC2 740 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 INPP4AQ96PE3 977 aaPredicted RBP16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 ACCSQ96QU6 501 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 MOV10L1Q9BXT6 1211 aaKnown RBP16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 ST6GALNAC4Q9H4F1 302 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 ACAD9Q9H845 621 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 FAM53CQ9NYF3 392 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 PCDHA10Q9Y5I2 948 aa16.88■□□□□ 0.29
SNCAIP-207ENST00000504884 PARP14Q460N5 1801 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 DKC1O60832 514 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 STAM2O75886 525 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 ZRANB2O95218 330 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 CCNE2O96020 404 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 CYP2J2P51589 502 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 SNRPFP62306 86 aaKnown RBP16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 ARID5AQ03989 594 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 BRD3Q15059 726 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 SH3D19Q5HYK7 790 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 GPIHBP1Q8IV16 184 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 MSANTD4Q8NCY6 345 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 CDHR1Q96JP9 859 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 IWS1Q96ST2 819 aa16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNCAIP-207ENST00000504884 GCNT4Q9P109 453 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms