RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 GPR182O15218 404 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 GPR32O75388 356 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 UPP2O95045 317 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 MCM7P33993 719 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 TXKP42681 527 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 ANO5Q75V66 913 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 OTUD6AQ7L8S5 288 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 CEP89Q96ST8 783 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 LXNQ9BS40 222 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 CYP26B1Q9NR63 512 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 LCHNA4D1U4 455 aa23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 NFX1Q12986 1120 aaKnown RBP23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 TTC38Q5R3I4 469 aa23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 SP7Q8TDD2 431 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 YME1L1Q96TA2 773 aa23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 OSMRQ99650 979 aa23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 CDHR5Q9HBB8 845 aa23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 ERVK-5Q9HDB9 667 aa23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 NOC2LQ9Y3T9 749 aaKnown RBP23.72■■□□□ 1.39
TRAPPC11-203ENST00000504526 CHD9Q3L8U1 2897 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 EVPLQ92817 2033 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 MAFO75444 373 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 ARHGEF15O94989 841 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 GJB2P29033 226 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 NLRP11P59045 1033 aaKnown RBP23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 TMEM40Q8WWA1 233 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 SLC7A3Q8WY07 619 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 ARNTL2Q8WYA1 636 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 DYDC2Q96IM9 177 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 TGS1Q96RS0 853 aaKnown RBP23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 EIF2AK1Q9BQI3 630 aaKnown RBP23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 TSPYL2Q9H2G4 693 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 RNF216Q9NWF9 866 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 RGL1Q9NZL6 768 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 SMC3Q9UQE7 1217 aa23.71■■□□□ 1.39
TRAPPC11-203ENST00000504526 LINC01553A4QN01 128 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 TMEM150BA6NC51 233 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 RBAK-RBAKDNI3L0D1 243 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 LYPLA2O95372 231 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 OR52Z1P0C646 297 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 YWHABP31946 246 aaKnown RBP23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 GPC3P51654 580 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 ERVK-21P61565 698 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 TMEM266Q2M3C6 531 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 LINC01599Q8WXQ3 324 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 CEP170P1Q96L14 293 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 PPP1R16BQ96T49 567 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 HSD17B14Q9BPX1 270 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 TMEM60Q9H2L4 133 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 ADAMTS10Q9H324 1103 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 WRAP73Q9P2S5 460 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 COL4A6Q14031 1691 aa23.7■■□□□ 1.38
TRAPPC11-203ENST00000504526 SLITRK3O94933 977 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 STAG3L1P0CL83 205 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 IGFBP4P22692 258 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 EIF4BP23588 611 aaKnown RBP23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 RFC5P40937 340 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 CYP4A11Q02928 519 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 ADGRE1Q14246 886 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 CTTNQ14247 550 aaKnown RBP23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 ZNF174Q15697 407 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 PLA2G4FQ68DD2 849 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 RTN4RL1Q86UN2 441 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 NPAS4Q8IUM7 802 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 TPH2Q8IWU9 490 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 SCLT1Q96NL6 688 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 SAMD11Q96NU1 681 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 SH2D3AQ9BRG2 576 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 TMX1Q9H3N1 280 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 CERS4Q9HA82 394 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 C1orf112Q9NSG2 853 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 ST3GAL5Q9UNP4 418 aa23.69■■□□□ 1.38
TRAPPC11-203ENST00000504526 H3BQV1 296 aa23.68■■□□□ 1.38
TRAPPC11-203ENST00000504526 GAS2O43903 313 aaKnown RBP23.68■■□□□ 1.38
TRAPPC11-203ENST00000504526 POU3F3P20264 500 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC11-203ENST00000504526 NPEPPSP55786 919 aa23.68■■□□□ 1.38
TRAPPC11-203ENST00000504526 FAM228AQ86W67 206 aa23.68■■□□□ 1.38
TRAPPC11-203ENST00000504526 DHX33Q9H6R0 707 aaKnown RBP23.68■■□□□ 1.38
TRAPPC11-203ENST00000504526 DENND3A2RUS2 1198 aa23.67■■□□□ 1.38
TRAPPC11-203ENST00000504526 GTPBP6O43824 516 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC11-203ENST00000504526 POLGP54098 1239 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC11-203ENST00000504526 ERMNQ8TAM6 284 aa23.67■■□□□ 1.38
TRAPPC11-203ENST00000504526 NLRP7Q8WX94 980 aa23.67■■□□□ 1.38
TRAPPC11-203ENST00000504526 GCOM2Q9BZD3 368 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC11-203ENST00000504526 SUCLA2Q9P2R7 463 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC11-203ENST00000504526 DARSP14868 501 aaKnown RBP23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 SARSP49591 514 aaKnown RBP23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 DRP2Q13474 957 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 CUL4AQ13619 759 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 XKR9Q5GH70 373 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 MCTP1Q6DN14 999 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 ZNF410Q86VK4 478 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 SLC17A8Q8NDX2 589 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 TCP11Q8WWU5 503 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 INO80BQ9C086 356 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 RGS18Q9NS28 235 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 ANKEF1Q9NU02 776 aa23.66■■□□□ 1.38
TRAPPC11-203ENST00000504526 POTEMA6NI47 508 aa23.65■■□□□ 1.38
TRAPPC11-203ENST00000504526 DGKIO75912 1065 aa23.65■■□□□ 1.38
TRAPPC11-203ENST00000504526 XRCC6P12956 609 aaKnown RBP eCLIP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms