RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ZNF579Q8NAF0 562 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-209ENST00000503346 PHOSPHO2Q8TCD6 241 aa20.38■□□□□ 0.85
PDLIM7-209ENST00000503346 SLC9A7Q96T83 725 aa20.38■□□□□ 0.85
PDLIM7-209ENST00000503346 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
PDLIM7-209ENST00000503346 LRWD1Q9UFC0 647 aa20.38■□□□□ 0.85
PDLIM7-209ENST00000503346 STK24Q9Y6E0 443 aa20.38■□□□□ 0.85
PDLIM7-209ENST00000503346 RBAK-RBAKDNI3L0D1 243 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 ZBTB39O15060 712 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 GPR32O75388 356 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 VTNP04004 478 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 ATP2A2P16615 1042 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 MUTP22033 750 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 RFC5P40937 340 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 CRYBB1P53674 252 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 WDR5P61964 334 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 SLC7A3Q8WY07 619 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 ZSCAN16Q9H4T2 348 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 DHX33Q9H6R0 707 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 AGO3Q9H9G7 860 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 AKT3Q9Y243 479 aa20.37■□□□□ 0.85
PDLIM7-209ENST00000503346 TET1Q8NFU7 2136 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 GRXCR1A8MXD5 290 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 KCNJ6P48051 423 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 DRP2Q13474 957 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 KIZQ2M2Z5 673 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 XKR9Q5GH70 373 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 ADAMTS10Q9H324 1103 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 CDHR5Q9HBB8 845 aa20.36■□□□□ 0.85
PDLIM7-209ENST00000503346 WDR81Q562E7 1941 aa20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 RARRES1P49788 294 aa20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 DNM2P50570 870 aa20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 GPC3P51654 580 aa20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 POLGP54098 1239 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 CDC42EP1Q00587 391 aa20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 FAM43BQ6ZT52 329 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 NACC1Q96RE7 527 aa20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 GINS2Q9Y248 185 aa20.35■□□□□ 0.85
PDLIM7-209ENST00000503346 GAS2O43903 313 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 CD52P31358 61 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 CCT6AP40227 531 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 NLRP11P59045 1033 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 DEFB103AP81534 67 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 SF3A1Q15459 793 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 POTEGQ6S5H5 508 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 SNX29Q8TEQ0 813 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 PIGOQ8TEQ8 1089 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 TMEM40Q8WWA1 233 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 PPP1R16BQ96T49 567 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 OSMRQ99650 979 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 PBX4Q9BYU1 374 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 SUCLA2Q9P2R7 463 aaPredicted RBP20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 DBR1Q9UK59 544 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 PADI3Q9ULW8 664 aa20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 LAMA2P24043 3122 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-209ENST00000503346 DNAJB2P25686 324 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 PAK2Q13177 524 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 EMC2Q15006 297 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 RAB30Q15771 203 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 ECM1Q16610 540 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 KRT79Q5XKE5 535 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 FAM173BQ6P4H8 233 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 HERC6Q8IVU3 1022 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 ERVK-5Q9HDB9 667 aa20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 NOC2LQ9Y3T9 749 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-209ENST00000503346 TMEM265A0A087WTH1 108 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 VWA3AA6NCI4 1184 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 PP2D1A8MPX8 630 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 RPS6KA5O75582 802 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 DGAT1O75907 488 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 AMHP03971 560 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 PBX2P40425 430 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 PTPAQ15257 358 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 ODR4Q5SWX8 454 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 SPRYD3Q8NCJ5 442 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 TCP11Q8WWU5 503 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 MTRQ99707 1265 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 MMTAG2Q9BU76 263 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 FTHL17Q9BXU8 183 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 XPNPEP1Q9NQW7 623 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 MSRAQ9UJ68 235 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 PCDHA11Q9Y5I1 949 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 CLIC4Q9Y696 253 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 SIP14410 1827 aa20.32■□□□□ 0.84
PDLIM7-209ENST00000503346 A0A087WWV3 80 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 GPR182O15218 404 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 DARSP14868 501 aaKnown RBP20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 EIF4BP23588 611 aaKnown RBP20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 RABGGTBP53611 331 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 ZNF410Q86VK4 478 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 FAM228AQ86W67 206 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 NLRP7Q8WX94 980 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 PSPC1Q8WXF1 523 aaKnown RBP20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 TMEM143Q96AN5 459 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 TIFAQ96CG3 184 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 AK8Q96MA6 479 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 ATP6V0A4Q9HBG4 840 aa20.31■□□□□ 0.84
PDLIM7-209ENST00000503346 BMP2KQ9NSY1 1161 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms