RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FAM124AQ86V42 546 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 KLHL36Q8N4N3 616 aa8.04□□□□□ -1.12
NIPBL-203ENST00000503274 NCAPD3P42695 1498 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-203ENST00000503274 ANKRD62A6NC57 917 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 CUTAO60888 179 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 RAB11FIP3O75154 756 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 ULK1O75385 1050 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 ADCY8P40145 1251 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 TOP3AQ13472 1001 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-203ENST00000503274 MOGSQ13724 837 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 ATL2Q8NHH9 583 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 FEZF2Q8TBJ5 459 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 WDR66Q8TBY9 1149 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 AJUBAQ96IF1 538 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 PARD6AQ9NPB6 346 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 USP40Q9NVE5 1235 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 USP36Q9P275 1121 aaKnown RBP8.03□□□□□ -1.12
NIPBL-203ENST00000503274 MSRAQ9UJ68 235 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 MCM8Q9UJA3 840 aa8.03□□□□□ -1.12
NIPBL-203ENST00000503274 MAFO75444 373 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-203ENST00000503274 PRPF6O94906 941 aaKnown RBP8.02□□□□□ -1.13
NIPBL-203ENST00000503274 MYBPC3Q14896 1274 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 GRAMD4Q6IC98 578 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 OTOP2Q7RTS6 562 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 RASSF3Q86WH2 238 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 REXO1L1PQ8IX06 675 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 MBD6Q96DN6 1003 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 ZNF496Q96IT1 587 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-203ENST00000503274 MYL10Q9BUA6 226 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 ZDHHC5Q9C0B5 715 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 KATNBL1Q9H079 304 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 MS4A5Q9H3V2 200 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 POFUT1Q9H488 388 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 ADAM29Q9UKF5 820 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 ATP8A1Q9Y2Q0 1164 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 ZDHHC9Q9Y397 364 aa8.02□□□□□ -1.13
NIPBL-203ENST00000503274 A0A0G2JNJ9 132 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 GPR39O43194 453 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 APOL3O95236 402 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 SESN3P58005 492 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 TMPRSS15P98073 1019 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 ADCY2Q08462 1091 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 MAP3K12Q12852 859 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 NOLC1Q14978 699 aaKnown RBP eCLIP8.01□□□□□ -1.13
NIPBL-203ENST00000503274 TMEM200BQ69YZ2 307 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 FRMD7Q6ZUT3 714 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 LHFPL2Q6ZUX7 228 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 HDGFL2Q7Z4V5 671 aaPredicted RBP8.01□□□□□ -1.13
NIPBL-203ENST00000503274 DDX42Q86XP3 938 aaKnown RBP eCLIP8.01□□□□□ -1.13
NIPBL-203ENST00000503274 IFNL2Q8IZJ0 200 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 RPGRQ92834 1020 aaKnown RBP8.01□□□□□ -1.13
NIPBL-203ENST00000503274 XYLT2Q9H1B5 865 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 SEMA4AQ9H3S1 761 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 Q9UFV3 132 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 CDC42EP3Q9UKI2 254 aa8.01□□□□□ -1.13
NIPBL-203ENST00000503274 NOC2LQ9Y3T9 749 aaKnown RBP8.01□□□□□ -1.13
NIPBL-203ENST00000503274 LCHNA4D1U4 455 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 OTOL1A6NHN0 477 aaPredicted RBP8□□□□□ -1.13
NIPBL-203ENST00000503274 ETV4P43268 484 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 KCNQ1P51787 676 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 BCAR1P56945 870 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 AMPD3Q01432 767 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 EIF4HQ15056 248 aaKnown RBP8□□□□□ -1.13
NIPBL-203ENST00000503274 RNF219Q5W0B1 726 aaPredicted RBP8□□□□□ -1.13
NIPBL-203ENST00000503274 IQSEC1Q6DN90 963 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 BORAQ6PGQ7 559 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 ESPNLQ6ZVH7 1005 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 KANSL1Q7Z3B3 1105 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 ZDHHC14Q8IZN3 488 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 CARD11Q9BXL7 1154 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 SMARCA2P51531 1590 aa8□□□□□ -1.13
NIPBL-203ENST00000503274 HMGCRP04035 888 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 CSF2RBP32927 897 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 KIAA1841Q6NSI8 718 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 SPATS2Q86XZ4 545 aaKnown RBP7.99□□□□□ -1.13
NIPBL-203ENST00000503274 KBTBD2Q8IY47 623 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 CLRN3Q8NCR9 226 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 ZCRB1Q8TBF4 217 aaKnown RBP7.99□□□□□ -1.13
NIPBL-203ENST00000503274 KCMF1Q9P0J7 381 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 KCNG1Q9UIX4 513 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 COL4A3BPQ9Y5P4 624 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 ATAD2BQ9ULI0 1458 aa7.99□□□□□ -1.13
NIPBL-203ENST00000503274 ELL2O00472 640 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-203ENST00000503274 MAFGO15525 162 aa7.98□□□□□ -1.13
NIPBL-203ENST00000503274 KDM1AO60341 852 aa7.98□□□□□ -1.13
NIPBL-203ENST00000503274 INHBBP09529 407 aa7.98□□□□□ -1.13
NIPBL-203ENST00000503274 USP10Q14694 798 aaKnown RBP7.98□□□□□ -1.13
NIPBL-203ENST00000503274 FRMD5Q7Z6J6 570 aa7.98□□□□□ -1.13
NIPBL-203ENST00000503274 LGI4Q8N135 537 aa7.98□□□□□ -1.13
NIPBL-203ENST00000503274 KRTAP4-2Q9BYR5 136 aa7.98□□□□□ -1.13
NIPBL-203ENST00000503274 PCDH12Q9NPG4 1184 aa7.98□□□□□ -1.13
NIPBL-203ENST00000503274 PHLDB1Q86UU1 1377 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 FAPQ12884 760 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 DGKDQ16760 1214 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 PTPROQ16827 1216 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 UNQ6494/PRO21346Q6UXR6 183 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 GPR155Q7Z3F1 870 aa7.97□□□□□ -1.13
NIPBL-203ENST00000503274 RALYLQ86SE5 291 aaKnown RBP7.97□□□□□ -1.13
NIPBL-203ENST00000503274 CXorf67Q86X51 503 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms