RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ASTN1O14525 1302 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 CTAGE9A4FU28 777 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 LRRC53A6NM62 1247 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 EIF3DO15371 548 aaKnown RBP eCLIP12.69□□□□□ -0.38
USP46-204ENST00000503060 EIF2AK2P19525 551 aaKnown RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 ITGB3BPQ13352 177 aaPredicted RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 ARHGAP27Q6ZUM4 889 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 RRAGAQ7L523 313 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 FRMD5Q7Z6J6 570 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 KIAA1328Q86T90 577 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 LSM14AQ8ND56 463 aaKnown RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 WNK4Q96J92 1243 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 INO80BQ9C086 356 aaPredicted RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 TRIM10Q9UDY6 481 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 FZD1Q9UP38 647 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 VDRP11473 427 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 PAX7P23759 505 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 ZNF131P52739 623 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 IGBP1P78318 339 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 PGM5Q15124 567 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 SKIV2LQ15477 1246 aaKnown RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 CACNA2D4Q7Z3S7 1137 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 RSPH1Q8WYR4 309 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 CCDC42Q96M95 316 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 NAPGQ99747 312 aaPredicted RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 LSM14BQ9BX40 385 aaKnown RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 CEP72Q9P209 647 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 ARHGAP20Q9P2F6 1191 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 SEL1LQ9UBV2 794 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 ARMCX3Q9UH62 379 aaPredicted RBP12.69□□□□□ -0.38
USP46-204ENST00000503060 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 GUCA1BQ9UMX6 200 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 ZHX2Q9Y6X8 837 aa12.69□□□□□ -0.38
USP46-204ENST00000503060 PARP14Q460N5 1801 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 hCG_2014768A0A024R1R8 64 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 ARHGEF35A5YM69 484 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 NOL4O94818 638 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 NR3C1P04150 777 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
USP46-204ENST00000503060 NMT1P30419 496 aaKnown RBP12.68□□□□□ -0.38
USP46-204ENST00000503060 MTMR1Q13613 665 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 TUBB2AQ13885 445 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 CCDC122Q5T0U0 273 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 REPS2Q8NFH8 660 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 JAKMIP2Q96AA8 810 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 TUBB2BQ9BVA1 445 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 RNF146Q9NTX7 359 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 GGA3Q9NZ52 723 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 CDC23Q9UJX2 597 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 P4HBP07237 508 aaKnown RBP12.68□□□□□ -0.38
USP46-204ENST00000503060 GUCY2CP25092 1073 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 RPL13P26373 211 aaKnown RBP12.68□□□□□ -0.38
USP46-204ENST00000503060 EIF4A3P38919 411 aaKnown RBP12.68□□□□□ -0.38
USP46-204ENST00000503060 HMGCS2P54868 508 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 NAP1L1P55209 391 aaKnown RBP12.68□□□□□ -0.38
USP46-204ENST00000503060 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 FIZ1Q96SL8 496 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 RMDN3Q96TC7 470 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 PDCD2LQ9BRP1 358 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 ZSWIM4Q9H7M6 989 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 PXMP2Q9NR77 195 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 TBC1D22BQ9NU19 505 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 TFR2Q9UP52 801 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 RIPK3Q9Y572 518 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 PPP2R3BQ9Y5P8 575 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 ZMYM2Q9UBW7 1377 aa12.68□□□□□ -0.38
USP46-204ENST00000503060 UBE4BO95155 1302 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 C19orf81C9J6K1 198 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 SLC16A3O15427 465 aaKnown RBP12.67□□□□□ -0.38
USP46-204ENST00000503060 TGFB1I1O43294 461 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 MYCLP12524 364 aaPredicted RBP12.67□□□□□ -0.38
USP46-204ENST00000503060 DSG3P32926 999 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 FBXO38Q6PIJ6 1188 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 GPC2Q8N158 579 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 KLRG1Q96E93 195 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 CRACR2AQ9BSW2 395 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
USP46-204ENST00000503060 SSC5DA1L4H1 1573 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 ZNF263O14978 683 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 CLIC2O15247 247 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 KRT86O43790 486 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 AKAP3O75969 853 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 EPS15P42566 896 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 VAV2P52735 878 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
USP46-204ENST00000503060 OAZ1P54368 228 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 CYP27A1Q02318 531 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 SPA17Q15506 151 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 NFIL3Q16649 462 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 ZC2HC1CQ53FD0 456 aaPredicted RBP12.67□□□□□ -0.38
USP46-204ENST00000503060 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
USP46-204ENST00000503060 ZNF720Q7Z2F6 126 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms