RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 RHBDD1Q8TEB9 315 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 C18orf8Q96DM3 657 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 ZNF576Q9H609 170 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 CYP26B1Q9NR63 512 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 TRIM17Q9Y577 477 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 PTPDC1A2A3K4 754 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 FIGNL2A6NMB9 653 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 CHURC1-FNTBB4DL54 471 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 RTN3O95197 1032 aaPredicted RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 HARSP12081 509 aaKnown RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 AKAP5P24588 427 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 HTR1BP28222 390 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 HSPA4P34932 840 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 LRRC14Q15048 493 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 PPA1Q15181 289 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 PGS1Q32NB8 556 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 KIAA1211Q6ZU35 1233 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 KLHL23Q8NBE8 558 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 ZSCAN18Q8TBC5 510 aaPredicted RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 LSM14BQ9BX40 385 aaKnown RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 OBP2BQ9NPH6 170 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 WASH6PQ9NQA3 447 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 PIH1D1Q9NWS0 290 aaKnown RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 NSMCE4AQ9NXX6 385 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 WDR35Q9P2L0 1181 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 L1RE1Q9UN81 338 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 EDARQ9UNE0 448 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 TMEM98Q9Y2Y6 226 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 TMEM94Q12767 1356 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 CC2D2AQ9P2K1 1620 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 H7C0S8 307 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 ALDH1A1P00352 501 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 CHGBP05060 677 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 ITPKAP23677 461 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 PHKA1P46020 1223 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 CASP5P51878 434 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 RELBQ01201 579 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 ALDH6A1Q02252 535 aaKnown RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 CREMQ03060 361 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 ARL13BQ3SXY8 428 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 KAZNQ674X7 775 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 NEK10Q6ZWH5 1172 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 CACNA2D3Q8IZS8 1091 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 CISD2Q8N5K1 135 aaKnown RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 EHBP1Q8NDI1 1231 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 PYM1Q9BRP8 204 aaKnown RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 TXLNGYQ9BZA5 131 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 TMEM60Q9H2L4 133 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 PRDM5Q9NQX1 630 aaPredicted RBP4.19□□□□□ -1.74
SUB1-202ENST00000502453 COQ3Q9NZJ6 369 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 TMOD4Q9NZQ9 345 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 DENND2AQ9ULE3 1009 aa4.19□□□□□ -1.74
SUB1-202ENST00000502453 FSCN2O14926 492 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 C5AR1P21730 350 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 MAGEA8P43361 318 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 DNM2P50570 870 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 SRSF2Q01130 221 aaKnown RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 NRG1Q02297 640 aaPredicted RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 NTRK3Q16288 839 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 GNASQ5JWF2 1037 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 IER5Q5VY09 327 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 CNSTQ6PJW8 725 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 C2CD5Q86YS7 1000 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 DZIP1LQ8IYY4 767 aaKnown RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 GOT1L1Q8NHS2 421 aaPredicted RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 GHITMQ9H3K2 345 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 RPAP3Q9H6T3 665 aaPredicted RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 FANCFQ9NPI8 374 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 CCDC177Q9NQR7 707 aaPredicted RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 SUSD2Q9UGT4 822 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 DAGLAQ9Y4D2 1042 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 PRAMEF27A3QJZ7 478 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 LGALS16A8MUM7 142 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 STAM2O75886 525 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 HNF4AP41235 474 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 MAN2A2P49641 1150 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 ARL4CP56559 192 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 EVCP57679 992 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 BECN1Q14457 450 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 TMEM266Q2M3C6 531 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 BBS9Q3SYG4 887 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 TXNDC11Q6PKC3 985 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 B4GALNT4Q76KP1 1039 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 TXLNBQ8N3L3 684 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 BVESQ8NE79 360 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 RSAD2Q8WXG1 361 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 TEKT1Q969V4 418 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 HIC2Q96JB3 615 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 TRIM5Q9C035 493 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 EPB41L4AQ9HCS5 686 aaPredicted RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 AKT3Q9Y243 479 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 USO1O60763 962 aaKnown RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 COBLO75128 1261 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 HRGP04196 525 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 SNRPB2P08579 225 aaKnown RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 ZSCAN22P10073 491 aaPredicted RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 NME2P22392 152 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 GPR3P46089 330 aa4.18□□□□□ -1.74
SUB1-202ENST00000502453 CEBPAP49715 358 aaPredicted RBP4.18□□□□□ -1.74
SUB1-202ENST00000502453 AFF3P51826 1226 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms