RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 FLOT1O75955 427 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 GFPT2O94808 682 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 VIL1P09327 827 aaKnown RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 FAM153BP0C7A2 387 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 GOLGA6DP0CG33 693 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 ARP10275 920 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 NOP2P46087 812 aaKnown RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 ZNF131P52739 623 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 RPS6KA1Q15418 735 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 FAM153CQ494X1 144 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 CEP55Q53EZ4 464 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 IFT20Q8IY31 132 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 GOLGA6AQ9NYA3 693 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 CWC15Q9P013 229 aaKnown RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 FAM153AQ9UHL3 310 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 TMEM59LQ9UK28 342 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 COL4A5P29400 1685 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 RAD51CO43502 376 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 ZBTB48P10074 688 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 TRADDQ15628 312 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 NFIL3Q16649 462 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 ZNF720Q7Z2F6 126 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 FAM178BQ8IXR5 827 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 BANK1Q8NDB2 785 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 TPCN2Q8NHX9 752 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 FAM76AQ8TAV0 307 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 LNX1Q8TBB1 728 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 CASKIN2Q8WXE0 1202 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 IFT81Q8WYA0 676 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 ZNF577Q9BSK1 485 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 GLIS2Q9BZE0 524 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 FBXO28Q9NVF7 368 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 TMOD2Q9NZR1 351 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 ZNF70Q9UC06 446 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-204ENST00000501271 LCMT1Q9UIC8 334 aa10.76□□□□□ -0.69
CLIP1-204ENST00000501271 F8VZ95 297 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 CES2O00748 559 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 C21orf2O43822 256 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 EVI5O60447 810 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 IVLP07476 585 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 TRIM49P0CI25 452 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 TRIM49CP0CI26 452 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 FMO5P49326 533 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 CYP2J2P51589 502 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 NNTQ13423 1086 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 CBWD6Q4V339 395 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 TTMPQ5BVD1 217 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 CBWD3Q5JTY5 395 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 CBWD5Q5RIA9 395 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 KLHL7Q8IXQ5 586 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 TAF4BQ92750 862 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 ZIM3Q96PE6 472 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 AGPAT3Q9NRZ7 376 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 ATP8B3O60423 1300 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 TNS1Q9HBL0 1735 aaKnown RBP10.75□□□□□ -0.69
CLIP1-204ENST00000501271 SHOX2O60902 331 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-204ENST00000501271 FERP16591 822 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 ANXA13P27216 316 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 TRAF1Q13077 416 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 PAK2Q13177 524 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 ODR4Q5SWX8 454 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 B3GNT9Q6UX72 402 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 U2AF1L4Q8WU68 220 aaKnown RBP10.75□□□□□ -0.69
CLIP1-204ENST00000501271 FAM151AQ8WW52 585 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 ARL8AQ96BM9 186 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 NACC1Q96RE7 527 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 LXNQ9BS40 222 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 MKNK1Q9BUB5 465 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 GPR88Q9GZN0 384 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 VCPKMTQ9H867 229 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 MRPL11Q9Y3B7 192 aaKnown RBP10.75□□□□□ -0.69
CLIP1-204ENST00000501271 UBE4BO95155 1302 aa10.75□□□□□ -0.69
CLIP1-204ENST00000501271 GOLGA8KD6RF30 607 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 PPP1R12BO60237 982 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 HSF2BPO75031 334 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 RAD17O75943 681 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 H2AFZP0C0S5 128 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SOX5P35711 763 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 STAT1P42224 750 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 GUCY2FP51841 1108 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 TNNC1P63316 161 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 MAPK7Q13164 816 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 IFI16Q16666 785 aaKnown RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 ALS2CLQ60I27 953 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 RSBN1LQ6PCB5 846 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 H2AFVQ71UI9 128 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 MIGA2Q7L4E1 593 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 VPS36Q86VN1 386 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 LDHDQ86WU2 507 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 TEX2Q8IWB9 1127 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 DAW1Q8N136 415 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 CHURC1Q8WUH1 139 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 CCDC43Q96MW1 224 aaKnown RBP10.74□□□□□ -0.69
CLIP1-204ENST00000501271 WDR11Q9BZH6 1224 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 DMAC2Q9NW81 257 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 SEL1LQ9UBV2 794 aa10.74□□□□□ -0.69
CLIP1-204ENST00000501271 ODF2LQ9ULJ1 636 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms