RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 ADAMTS1Q9UHI8 967 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 MOSPD1Q9UJG1 213 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 MYH2Q9UKX2 1941 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 ASXL2Q76L83 1435 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 PAEPP09466 180 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 ZNF211Q13398 564 aaPredicted RBP12.55□□□□□ -0.4
PBX1-211ENST00000498497 THOC5Q13769 683 aaKnown RBP12.55□□□□□ -0.4
PBX1-211ENST00000498497 LRIG3Q6UXM1 1119 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 USP38Q8NB14 1042 aa12.55□□□□□ -0.4
PBX1-211ENST00000498497 MAST1Q9Y2H9 1570 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 DUOX2Q9NRD8 1548 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 RNASEH1O60930 286 aaKnown RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 HARSP12081 509 aaKnown RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 HDAC4P56524 1084 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 R3HDM1Q15032 1099 aaKnown RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 RPS6KA1Q15418 735 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 EARS2Q5JPH6 523 aaKnown RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 EPHA10Q5JZY3 1008 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 RBM44Q6ZP01 1051 aaKnown RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 ASRGL1Q7L266 308 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 PIP4K2CQ8TBX8 421 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 LRRC37BQ96QE4 947 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 PITPNM3Q9BZ71 974 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 FBXO9Q9UK97 447 aaPredicted RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 MAST3O60307 1309 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 PP2D1A8MPX8 630 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 SPAG7O75391 227 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 OXSR1O95747 527 aaPredicted RBP12.54□□□□□ -0.4
PBX1-211ENST00000498497 FGAP02671 866 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 CCDC166P0CW27 439 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 FECHP22830 423 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 KCNQ4P56696 695 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 GSTM4Q03013 218 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 WDR72Q3MJ13 1102 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 ACSBG2Q5FVE4 666 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 EMC10Q5UCC4 262 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 VPS52Q8N1B4 723 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 TIPINQ9BVW5 301 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 AASDHPPTQ9NRN7 309 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 PREX1Q8TCU6 1659 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 XDHP47989 1333 aa12.54□□□□□ -0.4
PBX1-211ENST00000498497 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 A8MU76 341 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 RAD21O60216 631 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 ASMTLO95671 621 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 MCM7P33993 719 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 RCVRNP35243 200 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 CNGA2Q16280 664 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 SRRM1Q8IYB3 904 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.53□□□□□ -0.46e-7■■■■■ 63.2
PBX1-211ENST00000498497 CNOT6LQ96LI5 555 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 CATSPER2Q96P56 530 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 PDP2Q9P2J9 529 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 PRKAG3Q9UGI9 489 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 NOC2LQ9Y3T9 749 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 ZBTB43O43298 467 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 PENKP01210 267 aaPredicted RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 GALNTL6Q49A17 601 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 RBM26Q5T8P6 1007 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 PDXDC1Q6P996 788 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 KLHL35Q6PF15 583 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 FBXO25Q8TCJ0 367 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 PUS3Q9BZE2 481 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 BHMT2Q9H2M3 363 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 TXLNGQ9NUQ3 528 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 PPP1R9AQ9ULJ8 1098 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 E7ENQ6 273 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 OVGP1Q12889 678 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 MTMR3Q13615 1198 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 SLC4A8Q2Y0W8 1093 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 NT5DC1Q5TFE4 455 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 MARK2Q7KZI7 788 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 ST13P4Q8IZP2 240 aaPredicted RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 GRIP2Q9C0E4 1043 aa12.53□□□□□ -0.4
PBX1-211ENST00000498497 DHX36Q9H2U1 1008 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.53□□□□□ -0.4
PBX1-211ENST00000498497 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 ZNF213O14771 459 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 RASGRF2O14827 1237 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 GRIA2P42262 883 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 CDR2Q01850 454 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.4
PBX1-211ENST00000498497 C16orf72Q14CZ0 275 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 CASP10Q92851 521 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 ZNF184Q99676 751 aaPredicted RBP12.52□□□□□ -0.4
PBX1-211ENST00000498497 DCLRE1BQ9H816 532 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.4
PBX1-211ENST00000498497 PRELID1Q9Y255 219 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 TRIM17Q9Y577 477 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 COMMD3-BMI1R4GMX3 469 aa12.52□□□□□ -0.4
PBX1-211ENST00000498497 PTPRUQ92729 1446 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms