RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SLC4A4Q9Y6R1 1079 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 MYH13Q9UKX3 1938 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 IRS2Q9Y4H2 1338 aa6.2□□□□□ -1.42
HMGXB4-208ENST00000498325 A0A0G2JLL6 359 aaPredicted RBP6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 PSMD14O00487 310 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 CPA1P15085 419 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 PTMSP20962 102 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 MCM5P33992 734 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 BMP8BP34820 402 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 DDIT3P35638 169 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 TDO2P48775 406 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 MECOMQ03112 1051 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 KIAA2012Q0VF49 1180 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 CRHR2Q13324 411 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 TTLL5Q6EMB2 1281 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 Q6ZUG5 572 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 LCORLQ8N3X6 602 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 GBP4Q96PP9 640 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 CRNKL1Q9BZJ0 848 aaKnown RBP6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 KRT23Q9C075 422 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 RNF41Q9H4P4 317 aaPredicted RBP6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 CNNM2Q9H8M5 875 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 KCNQ5Q9NR82 932 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 ATP8A2Q9NTI2 1148 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 SMC3Q9UQE7 1217 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 SUGT1Q9Y2Z0 365 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 MYO5AQ9Y4I1 1855 aaKnown RBP6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 FAM205AQ6ZU69 1335 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 WDR19Q8NEZ3 1342 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 LRRC37AA6NMS7 1700 aa6.19□□□□□ -1.42
HMGXB4-208ENST00000498325 DUOX1Q9NRD9 1551 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 DNAJC25-GNG10A0A024R161 153 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 GSG1L2A8MUP6 293 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 H3BRB1 525 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 SLC3A2P08195 630 aaKnown RBP6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 PCP11498 1178 aaKnown RBP6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 SYN1P17600 705 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 NT5C2P49902 561 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 HK2P52789 917 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 ERVFC1P60507 584 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 HAND2P61296 217 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 EXOSC10Q01780 885 aaKnown RBP6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 SP3Q02447 781 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 RALGPS1Q5JS13 557 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 MFSD6Q6ZSS7 791 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 GLYCTKQ8IVS8 523 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 AMOTL1Q8IY63 956 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 FBXL16Q8N461 479 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 MIGA1Q8NAN2 632 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 ZNF274Q96GC6 653 aaPredicted RBP6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 ARID3AQ99856 593 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 RIOK1Q9BRS2 568 aaKnown RBP6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 MTA3Q9BTC8 594 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 NIF3L1Q9GZT8 377 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 TUT1Q9H6E5 874 aaKnown RBP6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 ZSWIM5Q9P217 1185 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 CAPN6Q9Y6Q1 641 aa6.18□□□□□ -1.42
HMGXB4-208ENST00000498325 COL1A1P02452 1464 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 MINDY4BA8MYZ0 360 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 GOLGA6L22H0YM25 854 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 FOXP2O15409 715 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 PRC1O43663 620 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 PRKAB2O43741 272 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 DHX16O60231 1041 aaKnown RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 PRDX5P30044 214 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 DYNLL1P63167 89 aaKnown RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 ARHGAP4P98171 946 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 TOB2Q14106 344 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 SART3Q15020 963 aaKnown RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 RAB3GAP1Q15042 981 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 ME3Q16798 604 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 MFSD14BQ5SR56 506 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 AKNAD1Q5T1N1 836 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 STOX1Q6ZVD7 989 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 CCDC83Q8IWF9 413 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 MB21D2Q8IYB1 491 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 TMTC2Q8N394 836 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 CCDC82Q8N4S0 544 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 MAFAQ8NHW3 353 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 BAHD1Q8TBE0 780 aaPredicted RBP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 ZNF507Q8TCN5 953 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 BRF1Q92994 677 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 TMEM87BQ96K49 555 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 CITED4Q96RK1 184 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 MIPEPQ99797 713 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 AGXT2Q9BYV1 514 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 AATFQ9NY61 560 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 ANAPC4Q9UJX5 808 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 TMEM59LQ9UK28 342 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 TPCN1Q9ULQ1 816 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 FZD1Q9UP38 647 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 KIF3AQ9Y496 699 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 TAF6LQ9Y6J9 622 aa6.17□□□□□ -1.42
HMGXB4-208ENST00000498325 MAST2Q6P0Q8 1798 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 TTC28Q96AY4 2481 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 CACNA1AO00555 2505 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 ERICH2A1L162 156 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 GPR182O15218 404 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 PFKFB2O60825 505 aa6.16□□□□□ -1.42
HMGXB4-208ENST00000498325 CBX7O95931 251 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms