RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 TMOD1P28289 359 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 RFC5P40937 340 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 EFCAB12Q6NXP0 572 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 SESTD1Q86VW0 696 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 GPBP1Q86WP2 473 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 ZBTB10Q96DT7 871 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 CCDC34Q96HJ3 373 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 MTRQ99707 1265 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
CTTN-208ENST00000498223 TRPV6Q9H1D0 765 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 CUEDC2Q9H467 287 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 ATP6V0A4Q9HBG4 840 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 BLOC1S4Q9NUP1 217 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 TRMT13Q9NUP7 481 aaKnown RBP12.73□□□□□ -0.37
CTTN-208ENST00000498223 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
CTTN-208ENST00000498223 B4GALT4O60513 344 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 DGAT1O75907 488 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 ZNF202O95125 648 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 BMP8BP34820 402 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 AFMP43652 599 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 CDK7P50613 346 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 AMPD3Q01432 767 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 TLE2Q04725 743 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 FAM160A1Q05DH4 1040 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 RAD51AP2Q09MP3 1159 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 EMC2Q15006 297 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 TARBP2Q15633 366 aaKnown RBP12.72□□□□□ -0.37
CTTN-208ENST00000498223 LRRC26Q2I0M4 334 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 FAM102BQ5T8I3 360 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 RSPH3Q86UC2 560 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 LRRC71Q8N4P6 559 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
CTTN-208ENST00000498223 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 CNNM3Q8NE01 707 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 TCP11Q8WWU5 503 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 STAMQ92783 540 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 GDF15Q99988 308 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 ZHX3Q9H4I2 956 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 LMBRD1Q9NUN5 540 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
CTTN-208ENST00000498223 AKT3Q9Y243 479 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 HPSEQ9Y251 543 aa12.72□□□□□ -0.37
CTTN-208ENST00000498223 SZT2Q5T011 3432 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 ZBTB42B2RXF5 422 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 M0QZ92 97 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 KINO60870 393 aaKnown RBP12.71□□□□□ -0.37
CTTN-208ENST00000498223 MAFO75444 373 aaPredicted RBP12.71□□□□□ -0.37
CTTN-208ENST00000498223 C22orf31O95567 290 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 LIG1P18858 919 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 MCM4P33991 863 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 CLCN3P51790 818 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 SLC12A3P55017 1021 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 HIC1Q14526 733 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 MARCH8Q5T0T0 291 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 RUFY4Q6ZNE9 571 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 DNAJB3Q8WWF6 145 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 SCLT1Q96NL6 688 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 MAGEF1Q9HAY2 307 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 PRDM5Q9NQX1 630 aaPredicted RBP12.71□□□□□ -0.37
CTTN-208ENST00000498223 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 PCDHA2Q9Y5H9 948 aa12.71□□□□□ -0.37
CTTN-208ENST00000498223 SCN5AQ14524 2016 aa12.71□□□□□ -0.38
CTTN-208ENST00000498223 LAMA3Q16787 3333 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 FAM237AA0A1B0GTK4 181 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 SMIM35A0A1B0GVV1 85 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 MBLAC1A4D2B0 266 aaPredicted RBP12.7□□□□□ -0.38
CTTN-208ENST00000498223 GAS2O43903 313 aaKnown RBP12.7□□□□□ -0.38
CTTN-208ENST00000498223 SLFN14P0C7P3 912 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 SYN1P17600 705 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 CYP11B2P19099 503 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 THPOP40225 353 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 PTK7Q13308 1070 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 BFSP2Q13515 415 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 SNX17Q15036 470 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 E2F4Q16254 413 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 LONRF3Q496Y0 759 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 NAALADL2Q58DX5 795 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 C1orf53Q5VUE5 145 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 RINT1Q6NUQ1 792 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 KRBA2Q6ZNG9 492 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 DYMQ7RTS9 669 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 FMR1NBQ8N0W7 255 aaPredicted RBP12.7□□□□□ -0.38
CTTN-208ENST00000498223 MCPH1Q8NEM0 835 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 LRRC15Q8TF66 581 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 PPP1R16BQ96T49 567 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 RUSC1Q9BVN2 902 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 DHX33Q9H6R0 707 aaKnown RBP12.7□□□□□ -0.38
CTTN-208ENST00000498223 POLD4Q9HCU8 107 aa12.7□□□□□ -0.38
CTTN-208ENST00000498223 SUCLA2Q9P2R7 463 aaPredicted RBP12.7□□□□□ -0.38
CTTN-208ENST00000498223 PRKAG2Q9UGJ0 569 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms