RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GCFC2P16383 781 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 TMOD1P28289 359 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 CLCN3P51790 818 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 CRYBB1P53674 252 aaPredicted RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 TFF2Q03403 129 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 GPM6BQ13491 265 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 BTG3Q14201 252 aaPredicted RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 PTPROQ16827 1216 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 KIZQ2M2Z5 673 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 TMEM266Q2M3C6 531 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 EFCAB12Q6NXP0 572 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 FAM43BQ6ZT52 329 aaPredicted RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 PIK3AP1Q6ZUJ8 805 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 RTN4RL1Q86UN2 441 aaPredicted RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 NPAS4Q8IUM7 802 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 NECAB1Q8N987 351 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 ETNPPLQ8TBG4 499 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 TMEM40Q8WWA1 233 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 GTF3C6Q969F1 213 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 ZNF689Q96CS4 500 aaPredicted RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 OSMRQ99650 979 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 RC3H2Q9HBD1 1191 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 ERVK-5Q9HDB9 667 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 COG5Q9UP83 839 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 AKT3Q9Y243 479 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 NOC2LQ9Y3T9 749 aaKnown RBP9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 RWDD3Q9Y3V2 267 aa9.55□□□□□ -0.88
HMGXB4-207ENST00000498212 DENND3A2RUS2 1198 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 C5orf67F2Z3F1 127 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 MGEA5O60502 916 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 CCNT1O60563 726 aaKnown RBP9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 GPR32O75388 356 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 FDPSP14324 419 aaKnown RBP9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 CTNNB1P35222 781 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 KRT2P35908 639 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 TBC1D8BQ0IIM8 1120 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 PPP4R3AQ6IN85 833 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 B3GNT9Q6UX72 402 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 CRIPAKQ8N1N5 446 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 LRRC71Q8N4P6 559 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 LINC01465Q8N7H1 131 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 NSUN7Q8NE18 718 aaKnown RBP9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 OXER1Q8TDS5 423 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 ADAMTS19Q8TE59 1207 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 HLA-CQ95604 372 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 MRPL38Q96DV4 380 aaKnown RBP9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 FAM20AQ96MK3 541 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 MAP7D2Q96T17 732 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 NAP1L4Q99733 375 aaKnown RBP9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 TMX1Q9H3N1 280 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 BRMS1Q9HCU9 246 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 SEPT9Q9UHD8 586 aaPredicted RBP9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 LRFN2Q9ULH4 789 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 ST3GAL5Q9UNP4 418 aa9.54□□□□□ -0.88
HMGXB4-207ENST00000498212 TBX3O15119 743 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 MARCH6O60337 910 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 RB1P06400 928 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 LINC00271P0C7V0 271 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 IBSPP21815 317 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 BMPR1AP36894 532 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 SARSP49591 514 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 KCNQ1P51787 676 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 NLRP11P59045 1033 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 NR5A1Q13285 461 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 PPP2R5CQ13362 524 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 TARBP2Q15633 366 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 MTERF2Q49AM1 385 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 TIGD5Q53EQ6 642 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 XKR3Q5GH77 459 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 EARS2Q5JPH6 523 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 FAM228AQ86W67 206 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 CMTR2Q8IYT2 770 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 ZNF710Q8N1W2 664 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 ADAM2Q99965 735 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 C11orf84Q9BUA3 381 aaPredicted RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 NIFKQ9BYG3 293 aaKnown RBP9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 KCNMB3Q9NPA1 279 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 RGS18Q9NS28 235 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 C1orf112Q9NSG2 853 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
HMGXB4-207ENST00000498212 TMEM150BA6NC51 233 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 FAM205CA6NFA0 338 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 C9IYK1 514 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 TNFRSF10AO00220 468 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 EML1O00423 815 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 JAK2O60674 1132 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 DKC1O60832 514 aaKnown RBP eCLIP9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 STBD1O95210 358 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 MMP1P03956 469 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 BMP1P13497 986 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 GPC3P51654 580 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 PSMC5P62195 406 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 TRIM29Q14134 588 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 PAN2Q504Q3 1202 aaKnown RBP9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 SLC24A5Q71RS6 500 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 SLFN12Q8IYM2 578 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms