RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 PHOSPHO2Q8TCD6 241 aa13.12□□□□□ -0.31
MRPL55-234ENST00000497758 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
MRPL55-234ENST00000497758 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
MRPL55-234ENST00000497758 LRWD1Q9UFC0 647 aa13.12□□□□□ -0.31
MRPL55-234ENST00000497758 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
MRPL55-234ENST00000497758 SQORQ9Y6N5 450 aa13.12□□□□□ -0.31
MRPL55-234ENST00000497758 KDM3AQ9Y4C1 1321 aa13.12□□□□□ -0.31
MRPL55-234ENST00000497758 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 STX6O43752 255 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 MAFO75444 373 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-234ENST00000497758 LYPLA2O95372 231 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 BMP15O95972 392 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 CD52P31358 61 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 CCT6AP40227 531 aaKnown RBP13.11□□□□□ -0.31
MRPL55-234ENST00000497758 CRYBB1P53674 252 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-234ENST00000497758 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
MRPL55-234ENST00000497758 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 PDIA5Q14554 519 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 TCTN1Q2MV58 587 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 ODR4Q5SWX8 454 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 MYOCDQ8IZQ8 938 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 DEFB123Q8N688 67 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 NLRP7Q8WX94 980 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 TIFAQ96CG3 184 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 OSMRQ99650 979 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-234ENST00000497758 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 ANKEF1Q9NU02 776 aa13.11□□□□□ -0.31
MRPL55-234ENST00000497758 CHD9Q3L8U1 2897 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 ZBTB39O15060 712 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 RPS6KA5O75582 802 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 RPA1P27694 616 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 PBX2P40425 430 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 RABGGTBP53611 331 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 DEFB103AP81534 67 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-234ENST00000497758 NFX1Q12986 1120 aaKnown RBP13.1□□□□□ -0.31
MRPL55-234ENST00000497758 EMC2Q15006 297 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 CATSPER3Q86XQ3 398 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 LINC01465Q8N7H1 131 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 SNX29Q8TEQ0 813 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 CEP89Q96ST8 783 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 FTHL17Q9BXU8 183 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 AGO3Q9H9G7 860 aaKnown RBP13.1□□□□□ -0.31
MRPL55-234ENST00000497758 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-234ENST00000497758 SUCLA2Q9P2R7 463 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-234ENST00000497758 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 MTMR6Q9Y217 621 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 PCDHA11Q9Y5I1 949 aa13.1□□□□□ -0.31
MRPL55-234ENST00000497758 TMEM265A0A087WTH1 108 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 VWA3AA6NCI4 1184 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 GPR182O15218 404 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 TLL1O43897 1013 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 GAS2O43903 313 aaKnown RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 GPR32O75388 356 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 MED24O75448 989 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 SPATA31C1P0DKV0 1188 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 XRCC6P12956 609 aaKnown RBP eCLIP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 GPC3P51654 580 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 RESTQ13127 1097 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 DRP2Q13474 957 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 ARL6IP4Q66PJ3 421 aaKnown RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 POTEGQ6S5H5 508 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 Q7L0L9 218 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 RHPN2Q8IUC4 686 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 TCP11Q8WWU5 503 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 PSPC1Q8WXF1 523 aaKnown RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 EVPLQ92817 2033 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 MTRQ99707 1265 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 ZSCAN16Q9H4T2 348 aaPredicted RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 SLC28A3Q9HAS3 691 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 ATP6V0A4Q9HBG4 840 aa13.09□□□□□ -0.31
MRPL55-234ENST00000497758 NOC2LQ9Y3T9 749 aaKnown RBP13.09□□□□□ -0.31
MRPL55-234ENST00000497758 DENND3A2RUS2 1198 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 ARHGEF35A5YM69 484 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 DGAT1O75907 488 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 MUTP22033 750 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 EIF4BP23588 611 aaKnown RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 RARRES1P49788 294 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 BECN1Q14457 450 aa13.08□□□□□ -0.32
MRPL55-234ENST00000497758 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 ZRSR1Q15695 479 aaKnown RBP13.08□□□□□ -0.32
MRPL55-234ENST00000497758 PPP2R2DQ66LE6 453 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms