RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 KLHL42Q9P2K6 505 aa9.42□□□□□ -0.9
GARNL3-221ENST00000497703 CNOT6Q9ULM6 557 aaKnown RBP9.42□□□□□ -0.9
GARNL3-221ENST00000497703 LCHNA4D1U4 455 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 MPIG6BO95866 241 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 MT-CO1P00395 513 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 CHGBP05060 677 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 MTHFD2P13995 350 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 ENPP1P22413 925 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 RGS3P49796 1198 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 NFATC3Q12968 1075 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 SMAD4Q13485 552 aaKnown RBP9.41□□□□□ -0.9
GARNL3-221ENST00000497703 PKN1Q16512 942 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 FSCN1Q16658 493 aaKnown RBP9.41□□□□□ -0.9
GARNL3-221ENST00000497703 WDR72Q3MJ13 1102 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 CCDC62Q6P9F0 684 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 CNKSR3Q6P9H4 555 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 STPG3Q8N7X2 389 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 LINC00482Q8N8I6 264 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 AMNQ9BXJ7 453 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 FBXO10Q9UK96 956 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 SYNPO2Q9UMS6 1093 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
GARNL3-221ENST00000497703 CEP164Q9UPV0 1460 aa9.4□□□□□ -0.9
GARNL3-221ENST00000497703 E2F8A0AVK6 867 aa9.4□□□□□ -0.9
GARNL3-221ENST00000497703 SNUPNO95149 360 aaKnown RBP9.4□□□□□ -0.9
GARNL3-221ENST00000497703 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
GARNL3-221ENST00000497703 ADAM9Q13443 819 aa9.4□□□□□ -0.9
GARNL3-221ENST00000497703 PDCD1Q15116 288 aa9.4□□□□□ -0.9
GARNL3-221ENST00000497703 ATG14Q6ZNE5 492 aa9.4□□□□□ -0.9
GARNL3-221ENST00000497703 RSAD2Q8WXG1 361 aa9.4□□□□□ -0.9
GARNL3-221ENST00000497703 RAX2Q96IS3 184 aa9.4□□□□□ -0.9
GARNL3-221ENST00000497703 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 MANFP55145 182 aaKnown RBP9.39□□□□□ -0.91
GARNL3-221ENST00000497703 MYBPC3Q14896 1274 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 ZNF385BQ569K4 471 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 LRSAM1Q6UWE0 723 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 OTOP2Q7RTS6 562 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 FUBP3Q96I24 572 aaKnown RBP eCLIP9.39□□□□□ -0.91
GARNL3-221ENST00000497703 PWWP2AQ96N64 755 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 DNAJC28Q9NX36 388 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 KCMF1Q9P0J7 381 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 PPP2R3BQ9Y5P8 575 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 NUMBLQ9Y6R0 609 aa9.39□□□□□ -0.91
GARNL3-221ENST00000497703 H0Y858 1186 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 CLEC2LP0C7M8 214 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 IL13RA1P78552 427 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 MESP2Q0VG99 397 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 NOLC1Q14978 699 aaKnown RBP eCLIP9.38□□□□□ -0.91
GARNL3-221ENST00000497703 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.38□□□□□ -0.91
GARNL3-221ENST00000497703 PHF19Q5T6S3 580 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 TRMT10BQ6PF06 316 aaKnown RBP9.38□□□□□ -0.91
GARNL3-221ENST00000497703 KANSL1Q7Z3B3 1105 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 C1orf162Q8NEQ5 155 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-221ENST00000497703 SSH1Q8WYL5 1049 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 FAXDC2Q96IV6 333 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 NOX5Q96PH1 765 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 SYT3Q9BQG1 590 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 SLC13A1Q9BZW2 595 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 SEMA4AQ9H3S1 761 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 MTG2Q9H4K7 406 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 L2HGDHQ9H9P8 463 aa9.38□□□□□ -0.91
GARNL3-221ENST00000497703 ELL2O00472 640 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-221ENST00000497703 XPOTO43592 962 aaKnown RBP9.37□□□□□ -0.91
GARNL3-221ENST00000497703 PCDH8O95206 1070 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 CT47B1P0C2W7 299 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-221ENST00000497703 XPAP23025 273 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-221ENST00000497703 THBS2P35442 1172 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 ACAP2Q15057 778 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 CT83Q5H943 113 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 FAM129CQ86XR2 697 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 CMIPQ8IY22 773 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 CBARPQ8N350 705 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-221ENST00000497703 BHLHE22Q8NFJ8 381 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-221ENST00000497703 HIST1H2AHQ96KK5 128 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 HIST1H2AJQ99878 128 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 KCND1Q9NSA2 647 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 CCM2LQ9NUG4 571 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-221ENST00000497703 FTSJ1Q9UET6 329 aa9.37□□□□□ -0.91
GARNL3-221ENST00000497703 TNKSO95271 1327 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 MYPNQ86TC9 1320 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 PRSS38A1L453 326 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 KLHL33A6NCF5 533 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 IL18BPO95998 194 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 PI3P19957 117 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 GPR3P46089 330 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 KRT85P78386 507 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 MRPS9P82933 396 aaKnown RBP9.36□□□□□ -0.91
GARNL3-221ENST00000497703 SPIDRQ14159 915 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 STILQ15468 1287 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 DGKDQ16760 1214 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 INAVAQ3KP66 663 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 GRAMD4Q6IC98 578 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 TMEFF1Q8IYR6 380 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 FNIP1Q8TF40 1166 aa9.36□□□□□ -0.91
GARNL3-221ENST00000497703 EAF2Q96CJ1 260 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms