RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 ZBTB40Q9NUA8 1239 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 MARCH2Q9P0N8 246 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 CNOT11Q9UKZ1 510 aaKnown RBP6.72□□□□□ -1.33
GGPS1-208ENST00000497327 KDM2BQ8NHM5 1336 aa6.72□□□□□ -1.33
GGPS1-208ENST00000497327 BCL9O00512 1426 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 ATRNO75882 1429 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 ARNTLO00327 626 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 SGSM2O43147 1006 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 SNRPA1P09661 255 aaKnown RBP6.71□□□□□ -1.34
GGPS1-208ENST00000497327 CNR2P34972 360 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 SARSP49591 514 aaKnown RBP6.71□□□□□ -1.34
GGPS1-208ENST00000497327 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
GGPS1-208ENST00000497327 DDB1Q16531 1140 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 POMZP3Q6PJE2 187 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 HHIPL2Q6UWX4 724 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 MIB1Q86YT6 1006 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 DCP2Q8IU60 420 aaKnown RBP6.71□□□□□ -1.34
GGPS1-208ENST00000497327 FTSJ3Q8IY81 847 aaKnown RBP6.71□□□□□ -1.34
GGPS1-208ENST00000497327 DDX1Q92499 740 aaKnown RBP6.71□□□□□ -1.34
GGPS1-208ENST00000497327 ZBTB8AQ96BR9 441 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 CCDC136Q96JN2 1154 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 STK31Q9BXU1 1019 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 TGIF2Q9GZN2 237 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 NTMQ9P121 344 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 DBF4Q9UBU7 674 aaPredicted RBP6.71□□□□□ -1.34
GGPS1-208ENST00000497327 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 DDX19BQ9UMR2 479 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 AFF2P51816 1311 aa6.71□□□□□ -1.34
GGPS1-208ENST00000497327 GLI3P10071 1580 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 UNCXA6NJT0 531 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 CYP2C8P10632 490 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 EIF2S2P20042 333 aaKnown RBP6.7□□□□□ -1.34
GGPS1-208ENST00000497327 GJA9P57773 515 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 PROSER3Q2NL68 480 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 TEX2Q8IWB9 1127 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 TTC5Q8N0Z6 440 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 Q8N1Y9 231 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 CRACR2BQ8N4Y2 399 aaPredicted RBP6.7□□□□□ -1.34
GGPS1-208ENST00000497327 NKX2-4Q9H2Z4 354 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 DDX21Q9NR30 783 aaKnown RBP eCLIP6.7□□□□□ -1.34
GGPS1-208ENST00000497327 CYP26B1Q9NR63 512 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 TMOD3Q9NYL9 352 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 CHPF2Q9P2E5 772 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 ASAP1Q9ULH1 1129 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 USP16Q9Y5T5 823 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 KCPQ6ZWJ8 1503 aa6.7□□□□□ -1.34
GGPS1-208ENST00000497327 K7ESM1 405 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 TBX1O43435 398 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 IGHDP01880 384 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 THBS2P35442 1172 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 NCAPHQ15003 741 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 MEX3CQ5U5Q3 659 aaKnown RBP6.69□□□□□ -1.34
GGPS1-208ENST00000497327 NLRP10Q86W26 655 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 CCDC103Q8IW40 242 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 ITPRIPQ8IWB1 547 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 FAM26EQ8N5C1 309 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 ADAMTS17Q8TE56 1095 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 RBM15Q96T37 977 aaKnown RBP eCLIP6.69□□□□□ -1.34
GGPS1-208ENST00000497327 C11orf84Q9BUA3 381 aaPredicted RBP6.69□□□□□ -1.34
GGPS1-208ENST00000497327 HYPKQ9NX55 129 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 TMEFF2Q9UIK5 374 aaPredicted RBP6.69□□□□□ -1.34
GGPS1-208ENST00000497327 TRPC5Q9UL62 973 aaPredicted RBP6.69□□□□□ -1.34
GGPS1-208ENST00000497327 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.69□□□□□ -1.34
GGPS1-208ENST00000497327 TOGARAM1Q9Y4F4 1720 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 WNK3Q9BYP7 1800 aa6.69□□□□□ -1.34
GGPS1-208ENST00000497327 C22orf46C9J442 243 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 ANXA1P04083 346 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 ITGB3P05106 788 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 NAT2P11245 290 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 SLC6A11P48066 632 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 CCT4P50991 539 aaKnown RBP6.68□□□□□ -1.34
GGPS1-208ENST00000497327 RBM10P98175 930 aaKnown RBP6.68□□□□□ -1.34
GGPS1-208ENST00000497327 HDAC1Q13547 482 aaPredicted RBP6.68□□□□□ -1.34
GGPS1-208ENST00000497327 ETV3LQ6ZN32 361 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 TTLL7Q6ZT98 887 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 BTN2A2Q8WVV5 523 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 PAPPAQ13219 1627 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 ADCY9O60503 1353 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 IBTKQ9P2D0 1353 aaPredicted RBP6.68□□□□□ -1.34
GGPS1-208ENST00000497327 THSD7AQ9UPZ6 1657 aa6.68□□□□□ -1.34
GGPS1-208ENST00000497327 VIRMAQ69YN4 1812 aaKnown RBP6.67□□□□□ -1.34
GGPS1-208ENST00000497327 PI4KAP2A4QPH2 592 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 NOP56O00567 594 aaKnown RBP6.67□□□□□ -1.34
GGPS1-208ENST00000497327 ATF4P18848 351 aaPredicted RBP6.67□□□□□ -1.34
GGPS1-208ENST00000497327 FPR2P25090 351 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 RPL13P26373 211 aaKnown RBP6.67□□□□□ -1.34
GGPS1-208ENST00000497327 BEND3Q5T5X7 828 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 KSR2Q6VAB6 950 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 CENPQQ7L2Z9 268 aaPredicted RBP6.67□□□□□ -1.34
GGPS1-208ENST00000497327 RIOX2Q8IUF8 465 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 PI4KAP1Q8N8J0 262 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 AP5M1Q9H0R1 490 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 CHMP4BQ9H444 224 aaKnown RBP6.67□□□□□ -1.34
GGPS1-208ENST00000497327 FBXL7Q9UJT9 491 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 INPP5FQ9Y2H2 1132 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 X6R8D5 127 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 ATP10DQ9P241 1426 aa6.67□□□□□ -1.34
GGPS1-208ENST00000497327 PXDNLA1KZ92 1463 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms