RNA–Protein interactions for RNA: ENST00000497250.5

CBWD5-233, Transcript of COBW domain containing 5, human

TSL 1 (best)

Gene CBWD5, Length 1,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD5-233	ENST00000497250	hCG_1642624	A0A1W2PR95	340 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	SPDYE3	A6NKU9	549 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	HBP1	O60381	514 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	NPR3	P17342	541 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	MTHFR	P42898	656 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	CRYBB1	P53674	252 aa	Predicted RBP	18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	NUCB1	Q02818	461 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	ITGB3BP	Q13352	177 aa	Predicted RBP	18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	SART3	Q15020	963 aa	Known RBP	18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	KIZ	Q2M2Z5	673 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	CWF19L1	Q69YN2	538 aa	Known RBP	18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	RALYL	Q86SE5	291 aa	Known RBP	18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	ZNF654	Q8IZM8	581 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	CTCFL	Q8NI51	663 aa	Predicted RBP	18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	FEZF2	Q8TBJ5	459 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	OSMR	Q99650	979 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	SDF4	Q9BRK5	362 aa		18.86	■□□□□ 0.61
CBWD5-233	ENST00000497250	FAM186A	A6NE01	2351 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	ZBTB42	B2RXF5	422 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	GPR32	O75388	356 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	IGHD	P01880	384 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	ATP4A	P20648	1035 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	KIF5B	P33176	963 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	RARS2	Q5T160	578 aa	Known RBP	18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	FLCN	Q8NFG4	579 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	LZTS2	Q9BRK4	669 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	LY9	Q9HBG7	655 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	AGO4	Q9HCK5	861 aa	Known RBP	18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	DCHS1	Q96JQ0	3298 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	MYO10	Q9HD67	2058 aa		18.85	■□□□□ 0.61
CBWD5-233	ENST00000497250	CXCL14	O95715	111 aa		18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	CCNE2	O96020	404 aa		18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	SLC26A2	P50443	739 aa		18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	SMC1A	Q14683	1233 aa	Known RBP	18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	ATAT1	Q5SQI0	421 aa		18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	ABHD15	Q6UXT9	468 aa		18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	SLC39A11	Q8N1S5	342 aa		18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	18.84	■□□□□ 0.61
CBWD5-233	ENST00000497250	DDAH1	O94760	285 aa		18.83	■□□□□ 0.61
CBWD5-233	ENST00000497250	PPM1A	P35813	382 aa		18.83	■□□□□ 0.61
CBWD5-233	ENST00000497250	ZNF484	Q5JVG2	852 aa		18.83	■□□□□ 0.61
CBWD5-233	ENST00000497250	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.83	■□□□□ 0.61
CBWD5-233	ENST00000497250	PLCD3	Q8N3E9	789 aa		18.83	■□□□□ 0.61
CBWD5-233	ENST00000497250	TDRD5	Q8NAT2	981 aa	Known RBP	18.83	■□□□□ 0.61
CBWD5-233	ENST00000497250	NT5C1B-RDH14	C9J2C7	533 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	VTN	P04004	478 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	AOC1	P19801	751 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	GNAQ	P50148	359 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	CLLU1OS	Q5K130	101 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	KIAA1841	Q6NSI8	718 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	ECHDC2	Q86YB7	292 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	CCDC60	Q8IWA6	550 aa	Predicted RBP	18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	CCDC82	Q8N4S0	544 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	DBR1	Q9UK59	544 aa	Known RBP	18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	UST	Q9Y2C2	406 aa		18.83	■□□□□ 0.6
CBWD5-233	ENST00000497250	MED19	A0JLT2	244 aa	Predicted RBP	18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	BACH1	O14867	736 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	HOXA2	O43364	376 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	EOMES	O95936	686 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	EPCAM	P16422	314 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	RXRA	P19793	462 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	ANGPT1	Q15389	498 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	CEP55	Q53EZ4	464 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	SWSAP1	Q6NVH7	229 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	CCDC105	Q8IYK2	499 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	LRRC43	Q8N309	656 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	RMDN1	Q96DB5	314 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	PGBD1	Q96JS3	809 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	RWDD1	Q9H446	243 aa	Predicted RBP	18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	CYP26B1	Q9NR63	512 aa		18.82	■□□□□ 0.6
CBWD5-233	ENST00000497250	COL1A2	P08123	1366 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	DDX39A	O00148	427 aa	Known RBP	18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	MEIS1	O00470	390 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	C22orf31	O95567	290 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	PDXDC2P	Q6P474	469 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	ABI1	Q8IZP0	508 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	DTWD2	Q8NBA8	298 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	SLC22A17	Q8WUG5	538 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	AUTS2	Q8WXX7	1259 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	ZNF302	Q9NR11	478 aa		18.81	■□□□□ 0.6
CBWD5-233	ENST00000497250	LOXHD1	Q8IVV2	1947 aa		18.8	■□□□□ 0.6
CBWD5-233	ENST00000497250	CA8	P35219	290 aa		18.8	■□□□□ 0.6
CBWD5-233	ENST00000497250	METAP2	P50579	478 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
CBWD5-233	ENST00000497250	COL9A3	Q14050	684 aa	Predicted RBP	18.8	■□□□□ 0.6
CBWD5-233	ENST00000497250	FAM160B1	Q5W0V3	765 aa		18.8	■□□□□ 0.6
CBWD5-233	ENST00000497250	METTL13	Q8N6R0	699 aa		18.8	■□□□□ 0.6
CBWD5-233	ENST00000497250	RNF169	Q8NCN4	708 aa		18.8	■□□□□ 0.6
CBWD5-233	ENST00000497250	DHX15	O43143	795 aa	Known RBP	18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	ZSCAN20	P17040	1043 aa	Predicted RBP	18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	BCAR1	P56945	870 aa		18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	NLRP11	P59045	1033 aa	Known RBP	18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	TMC5	Q6UXY8	1006 aa		18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	HEATR3	Q7Z4Q2	680 aa		18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	ZNF598	Q86UK7	904 aa	Known RBP	18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	RAB11FIP4	Q86YS3	637 aa		18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	VPS52	Q8N1B4	723 aa		18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	ADAMTS10	Q9H324	1103 aa		18.79	■□□□□ 0.6
CBWD5-233	ENST00000497250	TDG	Q13569	410 aa		18.78	■□□□□ 0.6
CBWD5-233	ENST00000497250	TYW1B	Q6NUM6	668 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms