RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 IBSPP21815 317 aaPredicted RBP21.99■■□□□ 1.11
COL20A1-208ENST00000496810 KRT2P35908 639 aa21.99■■□□□ 1.11
COL20A1-208ENST00000496810 NFX1Q12986 1120 aaKnown RBP21.99■■□□□ 1.11
COL20A1-208ENST00000496810 SKIV2LQ15477 1246 aaKnown RBP21.99■■□□□ 1.11
COL20A1-208ENST00000496810 FAM228AQ86W67 206 aa21.99■■□□□ 1.11
COL20A1-208ENST00000496810 HAS1Q92839 578 aa21.99■■□□□ 1.11
COL20A1-208ENST00000496810 CEP89Q96ST8 783 aa21.99■■□□□ 1.11
COL20A1-208ENST00000496810 CEP131Q9UPN4 1083 aa21.99■■□□□ 1.11
COL20A1-208ENST00000496810 PLXNA4Q9HCM2 1894 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 CCNT1O60563 726 aaKnown RBP21.98■■□□□ 1.11
COL20A1-208ENST00000496810 RPS6KA5O75582 802 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 TARBP2Q15633 366 aaKnown RBP21.98■■□□□ 1.11
COL20A1-208ENST00000496810 TJAP1Q5JTD0 557 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 PPP4R3AQ6IN85 833 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 EFCAB12Q6NXP0 572 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 CCDC83Q8IWF9 413 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 RDM1Q8NG50 284 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 WASF1Q92558 559 aa21.98■■□□□ 1.11
COL20A1-208ENST00000496810 ZNF689Q96CS4 500 aaPredicted RBP21.98■■□□□ 1.11
COL20A1-208ENST00000496810 WRAP73Q9P2S5 460 aaPredicted RBP21.98■■□□□ 1.11
COL20A1-208ENST00000496810 C5orf42Q9H799 3197 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 BTBD18B2RXH4 712 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 DGKIO75912 1065 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 MMP1P03956 469 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 MTERF2Q49AM1 385 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 PLA2G4FQ68DD2 849 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 TMEM192Q8IY95 271 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 FTHL17Q9BXU8 183 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 ST3GAL5Q9UNP4 418 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 AKT3Q9Y243 479 aa21.97■■□□□ 1.11
COL20A1-208ENST00000496810 GCFC2P16383 781 aaKnown RBP21.96■■□□□ 1.11
COL20A1-208ENST00000496810 KCNQ1P51787 676 aa21.96■■□□□ 1.11
COL20A1-208ENST00000496810 CRYBB1P53674 252 aaPredicted RBP21.96■■□□□ 1.11
COL20A1-208ENST00000496810 NLRP11P59045 1033 aaKnown RBP21.96■■□□□ 1.11
COL20A1-208ENST00000496810 GUCY1B3Q02153 619 aa21.96■■□□□ 1.11
COL20A1-208ENST00000496810 PPP2R5CQ13362 524 aa21.96■■□□□ 1.11
COL20A1-208ENST00000496810 PAN2Q504Q3 1202 aaKnown RBP21.96■■□□□ 1.11
COL20A1-208ENST00000496810 DIS3L2Q8IYB7 885 aaKnown RBP21.96■■□□□ 1.11
COL20A1-208ENST00000496810 FIBCD1Q8N539 461 aa21.96■■□□□ 1.11
COL20A1-208ENST00000496810 ATXN2LQ8WWM7 1075 aaKnown RBP21.96■■□□□ 1.11
COL20A1-208ENST00000496810 ASB2Q96Q27 587 aa21.96■■□□□ 1.11
COL20A1-208ENST00000496810 ADAMTS10Q9H324 1103 aa21.96■■□□□ 1.11
COL20A1-208ENST00000496810 MAGEB2O15479 319 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 EIF5BO60841 1220 aaKnown RBP21.95■■□□□ 1.1
COL20A1-208ENST00000496810 CTNNB1P35222 781 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 SPIRE1Q08AE8 756 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 ANO5Q75V66 913 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 NPAS4Q8IUM7 802 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 MAP7D2Q96T17 732 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 ADAM2Q99965 735 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 NRBP2Q9NSY0 501 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 LIMCH1Q9UPQ0 1083 aa21.95■■□□□ 1.1
COL20A1-208ENST00000496810 MRPL42Q9Y6G3 142 aaKnown RBP21.95■■□□□ 1.1
COL20A1-208ENST00000496810 H3BNC9 293 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 GPC3P51654 580 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 TBC1D8BQ0IIM8 1120 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 GPM6BQ13491 265 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 BTG3Q14201 252 aaPredicted RBP21.94■■□□□ 1.1
COL20A1-208ENST00000496810 XKR3Q5GH77 459 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 ZNF579Q8NAF0 562 aaKnown RBP21.94■■□□□ 1.1
COL20A1-208ENST00000496810 FAM20AQ96MK3 541 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 SAMD11Q96NU1 681 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 NIFKQ9BYG3 293 aaKnown RBP21.94■■□□□ 1.1
COL20A1-208ENST00000496810 HCSTQ9UBK5 93 aa21.94■■□□□ 1.1
COL20A1-208ENST00000496810 CSPG5O95196 566 aa21.93■■□□□ 1.1
COL20A1-208ENST00000496810 FGFR4P22455 802 aa21.93■■□□□ 1.1
COL20A1-208ENST00000496810 MRPS5P82675 430 aaKnown RBP21.93■■□□□ 1.1
COL20A1-208ENST00000496810 CLP1Q92989 425 aaKnown RBP21.93■■□□□ 1.1
COL20A1-208ENST00000496810 NECAB3Q96P71 396 aaPredicted RBP21.93■■□□□ 1.1
COL20A1-208ENST00000496810 RGL1Q9NZL6 768 aa21.93■■□□□ 1.1
COL20A1-208ENST00000496810 LMCD1Q9NZU5 365 aa21.93■■□□□ 1.1
COL20A1-208ENST00000496810 DDX11L8A8MPP1 907 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 C9IYK1 514 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 CSDE1O75534 798 aaKnown RBP21.92■■□□□ 1.1
COL20A1-208ENST00000496810 SARSP49591 514 aaKnown RBP21.92■■□□□ 1.1
COL20A1-208ENST00000496810 NPEPPSP55786 919 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 PSMC5P62195 406 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 DSC3Q14574 896 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 NCAPH2Q6IBW4 605 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 MRPL38Q96DV4 380 aaKnown RBP21.92■■□□□ 1.1
COL20A1-208ENST00000496810 LXNQ9BS40 222 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 BRMS1Q9HCU9 246 aa21.92■■□□□ 1.1
COL20A1-208ENST00000496810 IGKV6-21A0A0C4DH24 114 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 DENND3A2RUS2 1198 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 C5orf67F2Z3F1 127 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 TBX3O15119 743 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 GPR182O15218 404 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 GRM6O15303 877 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 QARSP47897 775 aaKnown RBP21.91■■□□□ 1.1
COL20A1-208ENST00000496810 CYP4A11Q02928 519 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 CMTR2Q8IYT2 770 aaKnown RBP21.91■■□□□ 1.1
COL20A1-208ENST00000496810 ADAMTS19Q8TE59 1207 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 RGS18Q9NS28 235 aa21.91■■□□□ 1.1
COL20A1-208ENST00000496810 BMP2KQ9NSY1 1161 aaPredicted RBP21.91■■□□□ 1.1
COL20A1-208ENST00000496810 ZBTB39O15060 712 aa21.9■■□□□ 1.1
COL20A1-208ENST00000496810 EIF4BP23588 611 aaKnown RBP21.9■■□□□ 1.1
COL20A1-208ENST00000496810 TMOD1P28289 359 aa21.9■■□□□ 1.1
COL20A1-208ENST00000496810 BMPR1AP36894 532 aa21.9■■□□□ 1.1
COL20A1-208ENST00000496810 FAM102BQ5T8I3 360 aa21.9■■□□□ 1.1
COL20A1-208ENST00000496810 KSR1Q8IVT5 923 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms