RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 A0A087X0T9 212 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 ZBED4O75132 1171 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 PPP1R37O75864 691 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 FAM228BP0C875 321 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 FDX1P10109 184 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 TCP1P17987 556 aaKnown RBP14.28□□□□□ -0.12
GARNL3-220ENST00000496711 EIF2AK2P19525 551 aaKnown RBP14.28□□□□□ -0.12
GARNL3-220ENST00000496711 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
GARNL3-220ENST00000496711 DMTNQ08495 405 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 PGM5Q15124 567 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
GARNL3-220ENST00000496711 PADI6Q6TGC4 694 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.28□□□□□ -0.12
GARNL3-220ENST00000496711 IKZF4Q9H2S9 585 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 SIX2Q9NPC8 291 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 ST7Q9NRC1 585 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 AGPAT3Q9NRZ7 376 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 TBC1D22BQ9NU19 505 aa14.28□□□□□ -0.12
GARNL3-220ENST00000496711 DBR1Q9UK59 544 aaKnown RBP14.28□□□□□ -0.12
GARNL3-220ENST00000496711 BZW2Q9Y6E2 419 aaKnown RBP14.28□□□□□ -0.12
GARNL3-220ENST00000496711 TARSL2A2RTX5 802 aaKnown RBP14.27□□□□□ -0.12
GARNL3-220ENST00000496711 K7ENM7 598 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 PDE2AO00408 941 aaPredicted RBP14.27□□□□□ -0.12
GARNL3-220ENST00000496711 MCM3P25205 808 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 COG2Q14746 738 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 ZNF572Q7Z3I7 529 aaPredicted RBP14.27□□□□□ -0.12
GARNL3-220ENST00000496711 KSR1Q8IVT5 923 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 SCYL3Q8IZE3 742 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 DAW1Q8N136 415 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 TAAR1Q96RJ0 339 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 OSBPL9Q96SU4 736 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 STRA6Q9BX79 667 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 UBXN6Q9BZV1 441 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 MTFR1LQ9H019 292 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 ABCB6Q9NP58 842 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 CNOT7Q9UIV1 285 aaKnown RBP14.27□□□□□ -0.12
GARNL3-220ENST00000496711 TSKSQ9UJT2 592 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 FRMD4BQ9Y2L6 1034 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 SAMM50Q9Y512 469 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 ZHX2Q9Y6X8 837 aa14.27□□□□□ -0.12
GARNL3-220ENST00000496711 DOCK5Q9H7D0 1870 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 MAP2K7O14733 419 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 BUB1O43683 1085 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 LYPLA2O95372 231 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 ANXA13P27216 316 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 PRKCIP41743 596 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 QARSP47897 775 aaKnown RBP14.27□□□□□ -0.13
GARNL3-220ENST00000496711 NAP1L1P55209 391 aaKnown RBP14.27□□□□□ -0.13
GARNL3-220ENST00000496711 JAM2P57087 298 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 ITIH3Q06033 890 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 ALCAMQ13740 583 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 NAB2Q15742 525 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 ENOX2Q16206 610 aaKnown RBP14.27□□□□□ -0.13
GARNL3-220ENST00000496711 C10orf76Q5T2E6 689 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 NBPF12Q5TAG4 269 aaPredicted RBP14.27□□□□□ -0.13
GARNL3-220ENST00000496711 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 RNF207Q6ZRF8 634 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 HDXQ7Z353 690 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 IRF2BP2Q7Z5L9 587 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 CREG2Q8IUH2 290 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 AS3MTQ9HBK9 375 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
GARNL3-220ENST00000496711 ADAMTS1Q9UHI8 967 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 GJA3Q9Y6H8 435 aa14.27□□□□□ -0.13
GARNL3-220ENST00000496711 MAPTP10636 758 aaKnown RBP14.26□□□□□ -0.13
GARNL3-220ENST00000496711 RARRES1P49788 294 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 CYP2J2P51589 502 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 PTK2Q05397 1052 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 UTP14CQ5TAP6 766 aaKnown RBP14.26□□□□□ -0.13
GARNL3-220ENST00000496711 SLC9A9Q8IVB4 645 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 RBM46Q8TBY0 533 aaKnown RBP14.26□□□□□ -0.13
GARNL3-220ENST00000496711 CCDC43Q96MW1 224 aaKnown RBP14.26□□□□□ -0.13
GARNL3-220ENST00000496711 RMDN3Q96TC7 470 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 PDCD2LQ9BRP1 358 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 PXMP2Q9NR77 195 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 LARSQ9P2J5 1176 aaKnown RBP14.26□□□□□ -0.13
GARNL3-220ENST00000496711 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
GARNL3-220ENST00000496711 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 ATP8B3O60423 1300 aa14.26□□□□□ -0.13
GARNL3-220ENST00000496711 DICER1Q9UPY3 1922 aaKnown RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 FZD9O00144 591 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 VWA5AO00534 786 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 KLRC1P26715 233 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 FMO5P49326 533 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 JAK3P52333 1124 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 BACE1P56817 501 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 C2orf54Q08AI8 447 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 SPP2Q13103 211 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 MYBPC2Q14324 1141 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 KIAA0753Q2KHM9 967 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 ZNF571Q7Z3V5 609 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-220ENST00000496711 COG1Q8WTW3 980 aa14.25□□□□□ -0.13
GARNL3-220ENST00000496711 ATG4CQ96DT6 458 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms