RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 NOSTRINQ8IVI9 506 aa23.15■■□□□ 1.3
COL9A2-211ENST00000496215 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.15■■□□□ 1.3
COL9A2-211ENST00000496215 LINC01465Q8N7H1 131 aa23.15■■□□□ 1.3
COL9A2-211ENST00000496215 TOP1MTQ969P6 601 aa23.15■■□□□ 1.3
COL9A2-211ENST00000496215 LXNQ9BS40 222 aa23.15■■□□□ 1.3
COL9A2-211ENST00000496215 CDHR5Q9HBB8 845 aa23.15■■□□□ 1.3
COL9A2-211ENST00000496215 PADI3Q9ULW8 664 aa23.15■■□□□ 1.3
COL9A2-211ENST00000496215 UPP2O95045 317 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 STBD1O95210 358 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 MCM7P33993 719 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 CRYBB1P53674 252 aaPredicted RBP23.14■■□□□ 1.29
COL9A2-211ENST00000496215 SP7Q8TDD2 431 aaPredicted RBP23.14■■□□□ 1.29
COL9A2-211ENST00000496215 ARNTL2Q8WYA1 636 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 YME1L1Q96TA2 773 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 OSMRQ99650 979 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 BACH2Q9BYV9 841 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 SUGCTQ9HAC7 445 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 PRDM6Q9NQX0 595 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 PCDHA12Q9UN75 941 aa23.14■■□□□ 1.29
COL9A2-211ENST00000496215 PRRC2BQ5JSZ5 2229 aaKnown RBP23.13■■□□□ 1.29
COL9A2-211ENST00000496215 DDX11L8A8MPP1 907 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 LPXNO60711 386 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 IGFBP4P22692 258 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 ORC2Q13416 577 aaPredicted RBP23.13■■□□□ 1.29
COL9A2-211ENST00000496215 TMEM266Q2M3C6 531 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 ODR4Q5SWX8 454 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 PLA2G4FQ68DD2 849 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 ANO5Q75V66 913 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 TMEM40Q8WWA1 233 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 TTC12Q9H892 705 aaPredicted RBP23.13■■□□□ 1.29
COL9A2-211ENST00000496215 NOL7Q9UMY1 257 aaKnown RBP23.13■■□□□ 1.29
COL9A2-211ENST00000496215 NLRC5Q86WI3 1866 aa23.13■■□□□ 1.29
COL9A2-211ENST00000496215 TXKP42681 527 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 TTC3P53804 2025 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 RALGAPA2Q2PPJ7 1873 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 RTN4RL1Q86UN2 441 aaPredicted RBP23.12■■□□□ 1.29
COL9A2-211ENST00000496215 ZNF710Q8N1W2 664 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 PPM1EQ8WY54 764 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 DYDC2Q96IM9 177 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 SCLT1Q96NL6 688 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 MTMR9Q96QG7 549 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 SH2D3AQ9BRG2 576 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 WRAP73Q9P2S5 460 aaPredicted RBP23.12■■□□□ 1.29
COL9A2-211ENST00000496215 NOC2LQ9Y3T9 749 aaKnown RBP23.12■■□□□ 1.29
COL9A2-211ENST00000496215 GTF3C3Q9Y5Q9 886 aa23.12■■□□□ 1.29
COL9A2-211ENST00000496215 GPR32O75388 356 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 NLRP11P59045 1033 aaKnown RBP23.11■■□□□ 1.29
COL9A2-211ENST00000496215 CYP4A11Q02928 519 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 NFX1Q12986 1120 aaKnown RBP23.11■■□□□ 1.29
COL9A2-211ENST00000496215 TTC38Q5R3I4 469 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 C4orf19Q8IY42 314 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 NEK9Q8TD19 979 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 TGS1Q96RS0 853 aaKnown RBP23.11■■□□□ 1.29
COL9A2-211ENST00000496215 CEP89Q96ST8 783 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 JPH2Q9BR39 696 aaPredicted RBP23.11■■□□□ 1.29
COL9A2-211ENST00000496215 ERVK-5Q9HDB9 667 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 CYP26B1Q9NR63 512 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 RGL1Q9NZL6 768 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 MTUS1Q9ULD2 1270 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 CUL9Q8IWT3 2517 aa23.11■■□□□ 1.29
COL9A2-211ENST00000496215 ENPP3O14638 875 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 GPR182O15218 404 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 GJB2P29033 226 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 TRAPPC10P48553 1259 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 DNM2P50570 870 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 GPC3P51654 580 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 ERVK-21P61565 698 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 GRB10Q13322 594 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 CCDC85BQ15834 202 aaPredicted RBP23.1■■□□□ 1.29
COL9A2-211ENST00000496215 FAM43BQ6ZT52 329 aaPredicted RBP23.1■■□□□ 1.29
COL9A2-211ENST00000496215 GDPD5Q8WTR4 605 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 SLC7A3Q8WY07 619 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 EIF2AK1Q9BQI3 630 aaKnown RBP23.1■■□□□ 1.29
COL9A2-211ENST00000496215 C17orf80Q9BSJ5 609 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 TSPYL2Q9H2G4 693 aaPredicted RBP23.1■■□□□ 1.29
COL9A2-211ENST00000496215 TMEM60Q9H2L4 133 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 TMX1Q9H3N1 280 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 ZSWIM4Q9H7M6 989 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 RC3H2Q9HBD1 1191 aaKnown RBP23.1■■□□□ 1.29
COL9A2-211ENST00000496215 PPME1Q9Y570 386 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 MTCH2Q9Y6C9 303 aa23.1■■□□□ 1.29
COL9A2-211ENST00000496215 IGKV6-21A0A0C4DH24 114 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 MAFO75444 373 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-211ENST00000496215 OR52Z1P0C646 297 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 POU3F3P20264 500 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-211ENST00000496215 U2AF2P26368 475 aaKnown RBP eCLIP23.09■■□□□ 1.29
COL9A2-211ENST00000496215 YWHABP31946 246 aaKnown RBP23.09■■□□□ 1.29
COL9A2-211ENST00000496215 CTTNQ14247 550 aaKnown RBP23.09■■□□□ 1.29
COL9A2-211ENST00000496215 FAM228AQ86W67 206 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 CRIPAKQ8N1N5 446 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 NLRP7Q8WX94 980 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 CEP170P1Q96L14 293 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 ADAMTS10Q9H324 1103 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 ST3GAL5Q9UNP4 418 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 SMC3Q9UQE7 1217 aa23.09■■□□□ 1.29
COL9A2-211ENST00000496215 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-211ENST00000496215 ADGRA3Q8IWK6 1321 aa23.08■■□□□ 1.29
COL9A2-211ENST00000496215 DENND3A2RUS2 1198 aa23.08■■□□□ 1.29
COL9A2-211ENST00000496215 POTEMA6NI47 508 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms