RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
VPS13B-206ENST00000496144 LENG1Q96BZ8 264 aaPredicted RBP9.45□□□□□ -0.9
VPS13B-206ENST00000496144 TRPV6Q9H1D0 765 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 STK39Q9UEW8 545 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 SOWAHBA6NEL2 793 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 ZBTB8OSQ8IWT0 167 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 IFT74Q96LB3 600 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 GDF15Q99988 308 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 C1orf112Q9NSG2 853 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 PCDHA5Q9Y5H7 936 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 NRCAMQ92823 1304 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 STXBP3O00186 592 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 NDUFV1P49821 464 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 JAG1P78504 1218 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 ARID5BQ14865 1188 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 PCNX4Q63HM2 1172 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 LHX8Q68G74 356 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 BLIDQ8IZY5 108 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 NME8Q8N427 588 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 PAGE5Q96GU1 130 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 RAD9AQ99638 391 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 ANO3Q9BYT9 981 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 SUGCTQ9HAC7 445 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 IGKV6D-41A0A0C4DH26 115 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 DPYDQ12882 1025 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 SLFN12Q8IYM2 578 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 C4orf32Q8N8J7 132 aa9.45□□□□□ -0.9
VPS13B-206ENST00000496144 CT47A1Q5JQC4 288 aaPredicted RBP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 GRAMD1CQ8IYS0 662 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 CDX2Q99626 313 aaPredicted RBP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 MRPL9Q9BYD2 267 aaKnown RBP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 SEMA6BQ9H3T3 888 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 SEPT9Q9UHD8 586 aaPredicted RBP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 ADAMTS5Q9UNA0 930 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 POTEB3A0JP26 581 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 PRR16Q569H4 304 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 POTEBQ6S5H4 581 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 GPKOWQ92917 476 aaPredicted RBP eCLIP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 HLA-CQ95604 372 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 GPM6BQ13491 265 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 PGM5Q15124 567 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 E2F4Q16254 413 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 MLKLQ8NB16 471 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 EPSTI1Q96J88 318 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 PIDD1Q9HB75 910 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 BARHL2Q9NY43 387 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 TCF7P36402 384 aaPredicted RBP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 POLGP54098 1239 aaPredicted RBP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 TAF12Q16514 161 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 CES5AQ6NT32 575 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 ARMCX5Q6P1M9 558 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 TMC6Q7Z403 805 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 PDCD2LQ9BRP1 358 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 PYM1Q9BRP8 204 aaKnown RBP9.44□□□□□ -0.9
VPS13B-206ENST00000496144 ADPGKQ9BRR6 497 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 MFSD1Q9H3U5 465 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 PRDM12Q9H4Q4 367 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 PHLPP2Q6ZVD8 1323 aa9.44□□□□□ -0.9
VPS13B-206ENST00000496144 MYH4Q9Y623 1939 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 WDR64B1ANS9 1081 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 SMIM10L2AP0DMW4 78 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 SMIM10L2BP0DMW5 78 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 DHX58Q96C10 678 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 IGFLR1Q9H665 355 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 PDGFCQ9NRA1 345 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 BMP2KQ9NSY1 1161 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-206ENST00000496144 RIPK3Q9Y572 518 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 FXR1P51114 621 aaKnown RBP eCLIP9.43□□□□□ -0.9
VPS13B-206ENST00000496144 IRF2BPLQ9H1B7 796 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 SLFN14P0C7P3 912 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 PURAQ00577 322 aaKnown RBP9.43□□□□□ -0.9
VPS13B-206ENST00000496144 PTGDRQ13258 359 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 ARL6IP4Q66PJ3 421 aaKnown RBP9.43□□□□□ -0.9
VPS13B-206ENST00000496144 SLC7A3Q8WY07 619 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 TRMT13Q9NUP7 481 aaKnown RBP9.43□□□□□ -0.9
VPS13B-206ENST00000496144 ATP2B1P20020 1258 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 MCM7P33993 719 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 LRCH2Q5VUJ6 765 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 USP49Q70CQ1 688 aa9.43□□□□□ -0.9
VPS13B-206ENST00000496144 SMAP1Q8IYB5 467 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-206ENST00000496144 CYTH3O43739 400 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 LGALS2P05162 132 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 PPM1AP35813 382 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 LONP1P36776 959 aaKnown RBP9.42□□□□□ -0.9
VPS13B-206ENST00000496144 VSTM4Q8IW00 320 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 SUGP1Q8IWZ8 645 aaKnown RBP9.42□□□□□ -0.9
VPS13B-206ENST00000496144 KLHDC9Q8NEP7 349 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 SCLYQ96I15 445 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 LMAN2LQ9H0V9 348 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 CERS4Q9HA82 394 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 RIC8AQ9NPQ8 531 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 B4GALT4O60513 344 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 SKILP12757 684 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 ATP1A3P13637 1013 aa9.42□□□□□ -0.9
VPS13B-206ENST00000496144 GRIK4Q16099 956 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms