RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 SF3A1Q15459 793 aaKnown RBP10.98□□□□□ -0.65
CALD1-223ENST00000496024 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
CALD1-223ENST00000496024 FOXD4L6Q3SYB3 417 aaPredicted RBP10.98□□□□□ -0.65
CALD1-223ENST00000496024 FBXO47Q5MNV8 452 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 FOXD4L3Q6VB84 417 aaPredicted RBP10.98□□□□□ -0.65
CALD1-223ENST00000496024 OTUD6AQ7L8S5 288 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 CATSPER3Q86XQ3 398 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 NME8Q8N427 588 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 SNX29Q8TEQ0 813 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 SCLT1Q96NL6 688 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 IFIH1Q9BYX4 1025 aaKnown RBP10.98□□□□□ -0.65
CALD1-223ENST00000496024 RAB34Q9BZG1 259 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 AGO3Q9H9G7 860 aaKnown RBP10.98□□□□□ -0.65
CALD1-223ENST00000496024 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 CLIC4Q9Y696 253 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 ARID2Q68CP9 1835 aa10.98□□□□□ -0.65
CALD1-223ENST00000496024 MICAL3Q7RTP6 2002 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 MAFO75444 373 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 ATP2A2P16615 1042 aaKnown RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 IBSPP21815 317 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 PRPHP41219 470 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 DNM2P50570 870 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 RABGGTBP53611 331 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 DEFB103AP81534 67 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 MAPK8IP2Q13387 824 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 BECN1Q14457 450 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 PDIA5Q14554 519 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 PLEKHG4Q58EX7 1191 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 RASIP1Q5U651 963 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 HAUS3Q68CZ6 603 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 TMCO2Q7Z6W1 182 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 IGSF22Q8N9C0 903 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 SLC7A3Q8WY07 619 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 TMEM143Q96AN5 459 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 CEP89Q96ST8 783 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 OSMRQ99650 979 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 POLR3CQ9BUI4 534 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 ZSCAN16Q9H4T2 348 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 SUCLA2Q9P2R7 463 aaPredicted RBP10.97□□□□□ -0.65
CALD1-223ENST00000496024 GBF1Q92538 1859 aa10.97□□□□□ -0.65
CALD1-223ENST00000496024 SZT2Q5T011 3432 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 ABHD14A-ACY1A0A1B0GW23 586 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 BAIAP3O94812 1187 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 LYPLA2O95372 231 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 ZSCAN22P10073 491 aaPredicted RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 RPA1P27694 616 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 MARCKSP29966 332 aaPredicted RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 PBX2P40425 430 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 WDR5P61964 334 aaKnown RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 NFX1Q12986 1120 aaKnown RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 PAK2Q13177 524 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 PKP1Q13835 747 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 EMC2Q15006 297 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 ECM1Q16610 540 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 KRT79Q5XKE5 535 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.96□□□□□ -0.65
CALD1-223ENST00000496024 TSHZ1Q6ZSZ6 1077 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 MAEAQ7L5Y9 396 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 RHPN2Q8IUC4 686 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 KSR1Q8IVT5 923 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 LINC01465Q8N7H1 131 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 TMEM40Q8WWA1 233 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 NLRP7Q8WX94 980 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 NACC1Q96RE7 527 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 PLIN2Q99541 437 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 JPH2Q9BR39 696 aaPredicted RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 ANKEF1Q9NU02 776 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 DDX19AQ9NUU7 478 aaKnown RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 DAXXQ9UER7 740 aaPredicted RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 PADI3Q9ULW8 664 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 KIAA1024Q9UPX6 916 aa10.96□□□□□ -0.65
CALD1-223ENST00000496024 NOC2LQ9Y3T9 749 aaKnown RBP10.96□□□□□ -0.65
CALD1-223ENST00000496024 PTPRSQ13332 1948 aa10.96□□□□□ -0.66
CALD1-223ENST00000496024 KDM3AQ9Y4C1 1321 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 A0A087WZ62 844 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 IGKV6-21A0A0C4DH24 114 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 USO1O60763 962 aaKnown RBP10.95□□□□□ -0.66
CALD1-223ENST00000496024 GPR32O75388 356 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 CSDE1O75534 798 aaKnown RBP10.95□□□□□ -0.66
CALD1-223ENST00000496024 RPS6KA5O75582 802 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 UPP2O95045 317 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 BMP15O95972 392 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 MYOGP15173 224 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 FGFR4P22455 802 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 RFC5P40937 340 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 RARRES1P49788 294 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 GPC3P51654 580 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 CRYBB1P53674 252 aaPredicted RBP10.95□□□□□ -0.66
CALD1-223ENST00000496024 SMAD3P84022 425 aaKnown RBP10.95□□□□□ -0.66
CALD1-223ENST00000496024 GRIN1Q05586 938 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 ARL6IP4Q66PJ3 421 aaKnown RBP10.95□□□□□ -0.66
CALD1-223ENST00000496024 Q7L0L9 218 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 MYOCDQ8IZQ8 938 aa10.95□□□□□ -0.66
CALD1-223ENST00000496024 PRPF31Q8WWY3 499 aaKnown RBP10.95□□□□□ -0.66
CALD1-223ENST00000496024 NLRP4Q96MN2 994 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms